Predicted Trait | |
Reported Trait | Multiple myeloma |
Mapped Trait(s) | multiple myeloma (EFO_0001378) |
Score Construction | |
PGS Name | PRS23_MM |
Development Method | |
Name | Genome-wide significant variants |
Parameters | <5E-08 |
Variants | |
Original Genome Build | GRCh38 |
Number of Variants | 23 |
Effect Weight Type | log(OR) |
PGS Source | |
PGS Catalog Publication (PGP) ID | PGP000310 |
Citation (link to publication) | Canzian F et al. Eur J Hum Genet (2021) |
Ancestry Distribution | |
Source of Variant Associations (GWAS) | European: 100% 733,337 individuals (100%) |
PGS Evaluation | European: 100% 1 Sample Sets |
Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) |
---|---|---|---|
GWAS Catalog: GCST001331 Europe PMC: 22120009 |
7,578 individuals | European | NR |
GWAS Catalog: GCST002140 Europe PMC: 23955597 |
9,641 individuals | European | NR |
GWAS Catalog: GCST002921 Europe PMC: 26007630 |
224,749 individuals | European | NR |
GWAS Catalog: GCST004483 Europe PMC: 27363682 |
241,704 individuals | European | NR |
GWAS Catalog: GCST006432 Europe PMC: 30213928 |
249,665 individuals | European | NR |
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|
PPM012970 | PSS009636| European Ancestry| 2,395 individuals |
PGP000310 | Canzian F et al. Eur J Hum Genet (2021) |
Reported Trait: Multiple myeloma | — | AUROC: 0.644 [0.622, 0.666] | Odds Ratio (OR, highest vs lowest quintiles): 3.18 [2.34, 4.33] | Age, sex, and geographic region of origin | Unweighted score (100% call rate) |
PPM012971 | PSS009636| European Ancestry| 2,395 individuals |
PGP000310 | Canzian F et al. Eur J Hum Genet (2021) |
Reported Trait: Multiple myeloma | — | AUROC: 0.628 [0.605, 0.65] | Odds Ratio (OR, highest vs lowest quintiles): 3.44 [2.53, 4.69] | Age, sex, and geographic region of origin | Weighted score (100% call rate) |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS009636 | — | — | [
|
— | European | — | NR | International Multiple Myeloma rESEarch (IMMEnSE) consortium |