Predicted Trait | |
Reported Trait | Albumin |
Mapped Trait(s) | serum albumin measurement (EFO_0004535) |
Score Construction | |
PGS Name | Albumin_PRSmix_sas |
Development Method | |
Name | PRSmix |
Parameters | power=0.95; p=0.05 |
Variants | |
Original Genome Build | hg38 |
Number of Variants | 2,071,924 |
Effect Weight Type | beta |
PGS Source | |
PGS Catalog Publication (PGP) ID | PGP000604 |
Citation (link to publication) | Truong B et al. Cell Genom (2024) |
Ancestry Distribution | |
Score Development/Training | South Asian: 100% 27,459 individuals (100%) |
PGS Evaluation | South Asian: 100% 1 Sample Sets |
Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) | Phenotype Definitions & Methods | Age of Study Participants | Participant Follow-up Time | Additional Ancestry Description | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
— | 27,459 individuals | South Asian | G&H | — | — | — | — | — |
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|
PPM020933 | PSS011460| South Asian Ancestry| 6,864 individuals |
PGP000604 | Truong B et al. Cell Genom (2024) |
Reported Trait: Albumin | — | — | Incremental R2 (Full model versus model with only covariates): 0.029 [0.021, 0.037] | age, sex, PC1, PC2, PC3, PC4, PC5, PC6, PC7, PC8, PC9, PC10 | Incremental R2 (Full model versus model with only covariates) |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS011460 | — | — | 6,864 individuals | — | South Asian | — | G&H | — |