Predicted Trait | |
Reported Trait | Dilated cardiomyopathy |
Mapped Trait(s) | dilated cardiomyopathy (EFO_0000407) |
Additional Trait Information | All DCM |
Score Construction | |
PGS Name | hermes.gwama |
Development Method | |
Name | PRS-CS |
Parameters | Genome-wide |
Variants | |
Original Genome Build | hg19 |
Number of Variants | 713,932 |
Effect Weight Type | beta |
PGS Source | |
PGS Catalog Publication (PGP) ID | PGP000608 |
Citation (link to publication) | Zheng SL et al. medRxiv (2023) Preprint |
Ancestry Distribution | |
Source of Variant Associations (GWAS) | European: 100% 804,997 individuals (100%) |
PGS Evaluation | European: 100% 1 Sample Sets |
Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) |
---|---|---|---|
— | [
|
European | HERMES |
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|
PPM021092 | PSS011521| European Ancestry| 347,585 individuals |
PGP000608 | Zheng SL et al. medRxiv (2023) |Pre |
Reported Trait: Dilated cardiomyopathy | OR: 1.56 | AUROC: 0.7 | R²: 0.048 | age, age^2, sex, PC1-10 | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS011521 | — | — | [ ,
45.8 % Male samples |
Mean = 69.8 years | European | — | UKB | — |