PGS Publication: PGP000499

Publication Information (EuropePMC)
Title Genome-wide association analyses identified novel susceptibility loci for pulmonary embolism among Han Chinese population.
PubMed ID 37076872(Europe PMC)
doi 10.1186/s12916-023-02844-4
Publication Date April 19, 2023
Journal BMC Med
Author(s) Zhang Z, Li H, Weng H, Zhou G, Chen H, Yang G, Zhang P, Zhang X, Ji Y, Ying K, Liu B, Xu Q, Tang Y, ... Zhu G, Liu Z, Xia S, Yang X, Dong L, Zhu L, Zeng M, Yuan Y, Yang Y, Zhang N, Xu X, Pang W, Zhang M, Zhang Y, Zhen K, Wang D, Lei J, Wu S, Shu S, Zhang Y, Zhang S, Gao Q, Huang Q, Deng C, Fu X, Chen G, Duan W, Wan J, Xie W, Zhang P, Wang S, Yang P, Zuo X, Zhai Z, Wang C, China pUlmonary Thromboembolism REgistry Study (CURES) investigators.Show more
Released in PGS Catalog: Sept. 1, 2023

Associated Polygenic Score(s)

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Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
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Not Reported

PGS Developed By This Publication

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Polygenic Score ID & Name
PGS Publication ID (PGP)
Reported Trait
Mapped Trait(s) (Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS003861
(PRS288_PE)
PGP000499 |
Zhang Z et al. BMC Med (2023)
Pulmonary embolismpulmonary embolism288
G
-
E
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003861/ScoringFiles/PGS003861.txt.gz
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Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

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PGS Performance
Metric ID (PPM)
Evaluated Score
PGS Sample Set ID
(PSS)
Performance Source
Trait
PGS Effect Sizes
(per SD change)
Classification Metrics
Other Metrics
Covariates Included in the Model
PGS Performance:
Other Relevant Information
PPM018751PGS003861
(PRS288_PE)
PSS011090|
East Asian Ancestry|
9,456 individuals
PGP000499 |
Zhang Z et al. BMC Med (2023)
Reported Trait: Pulmonary embolismAUROC: 0.765Odds ratio (OR, 30-70th quantile vs <90th quantile): 5.08 [4.109, 6.282]
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Evaluated Samples

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PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods
Participant Follow-up Time
Sample Numbers
Age of Study Participants
Sample Ancestry
Additional Ancestry Description
Cohort(s)
Additional Sample/Cohort Information
PSS011090
[
  • 646 cases
  • , 8,810 controls
]
,
46.34 % Male samples
East Asian
(Han Chinese)
CURES_China
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