Predicted Trait | |
Reported Trait | Body mass index (BMI) |
Mapped Trait(s) | body mass index (EFO_0004340) |
Score Construction | |
PGS Name | adult_BMI |
Development Method | |
Name | Genome-wide significant SNPs |
Parameters | r2 ≤ 0.001, distance ≥ 250 kb, 0.01 ≤ MAF ≤ 0.99 |
Variants | |
Original Genome Build | GRCh37 |
Number of Variants | 1,127 |
Effect Weight Type | beta |
PGS Source | |
PGS Catalog Publication (PGP) ID | PGP000585 |
Citation (link to publication) | Hawkes G et al. Diabetologia (2023) |
Ancestry Distribution | |
Source of Variant Associations (GWAS) | European: 100% 441,761 individuals (100%) |
PGS Evaluation | European: 100% 2 Sample Sets |
Study Identifiers | Sample Numbers | Sample Ancestry | Cohort(s) |
---|---|---|---|
— | 441,761 individuals | European | UKB |
PGS Performance Metric ID (PPM) |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|
PPM020771 | PSS011401| European Ancestry| 5,774 individuals |
PGP000585 | Hawkes G et al. Diabetologia (2023) |
Reported Trait: Adulthood body mass index (at age 44 years) | OR: 1.55 [1.43, 1.67] | — | — | — | Odds ratio for having a BMI greater than 1 standard deviation from the mean |
PPM020772 | PSS011402| European Ancestry| 4,704 individuals |
PGP000585 | Hawkes G et al. Diabetologia (2023) |
Reported Trait: Childhood body mass index (at age 11 years) | OR: 1.32 [1.2, 1.44] | — | — | — | Odds ratio for having a BMI greater than 1 standard deviation from the mean |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS011402 | — | — | 4,704 individuals | — | European | — | NCDS | — |
PSS011401 | — | — | 5,774 individuals | — | European | — | NCDS | — |