Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0004344 |
Description | The mass or quantity of heaviness of an individual at BIRTH. It is expressed by units of pounds... or kilograms.Show more |
Trait category |
Body measurement
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Synonym | birthweight |
Mapped terms |
3 mapped terms
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Polygenic Score ID & Name
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PGS Publication ID (PGP)
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Reported Trait
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Mapped Trait(s) (Ontology)
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Number of Variants
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Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link)
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PGS001226 (GBE_INI20022) | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Birth weight | birth weight | 6,278 | - | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001226/ScoringFiles/PGS001226.txt.gz |
PGS001892 (portability-PLR_birth_weight) | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Birth weight | birth weight | 35,060 | - | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001892/ScoringFiles/PGS001892.txt.gz |
PGS002105 (portability-ldpred2_birth_weight) | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Birth weight | birth weight | 827,714 | - | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002105/ScoringFiles/PGS002105.txt.gz |
PGS003494 (cont-decay-birth_weight) | PGP000457 | Ding Y et al. bioRxiv (2022) |Pre | Birth weight | birth weight | 979,739 | - | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003494/ScoringFiles/PGS003494.txt.gz |
PGS004426 (X20022.score) | PGP000561 | Jung H et al. Commun Biol (2024) | Birth weight | birth weight | 1,059,939 | - | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004426/ScoringFiles/PGS004426.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score
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PGS Sample Set ID (PSS) |
Performance Source
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Trait
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PGS Effect Sizes (per SD change) |
Classification Metrics
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Other Metrics
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Covariates Included in the Model
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PGS Performance: Other Relevant Information |
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PPM008644 | PGS001226 (GBE_INI20022) | PSS004896| African Ancestry| 1,708 individuals | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Reported Trait: Birth weight | — | — | R²: 0.04004 [0.0307, 0.04937] Incremental R2 (full-covars): 0.00368 PGS R2 (no covariates): 0.00672 [0.00276, 0.01067] | age, sex, UKB array type, Genotype PCs | — |
PPM008645 | PGS001226 (GBE_INI20022) | PSS004897| East Asian Ancestry| 609 individuals | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Reported Trait: Birth weight | — | — | R²: 0.04464 [0.02551, 0.06377] Incremental R2 (full-covars): 0.01768 PGS R2 (no covariates): 0.02148 [0.00789, 0.03508] | age, sex, UKB array type, Genotype PCs | — |
PPM008646 | PGS001226 (GBE_INI20022) | PSS004898| European Ancestry| 12,908 individuals | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Reported Trait: Birth weight | — | — | R²: 0.06034 [0.05461, 0.06608] Incremental R2 (full-covars): 0.02543 PGS R2 (no covariates): 0.02732 [0.02333, 0.03131] | age, sex, UKB array type, Genotype PCs | — |
PPM008647 | PGS001226 (GBE_INI20022) | PSS004899| South Asian Ancestry| 1,908 individuals | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Reported Trait: Birth weight | — | — | R²: 0.04888 [0.03957, 0.05819] Incremental R2 (full-covars): 0.00482 PGS R2 (no covariates): 0.00796 [0.00404, 0.01188] | age, sex, UKB array type, Genotype PCs | — |
PPM008648 | PGS001226 (GBE_INI20022) | PSS004900| European Ancestry| 39,107 individuals | PGP000244 | Tanigawa Y et al. PLoS Genet (2022) | Reported Trait: Birth weight | — | — | R²: 0.05162 [0.04837, 0.05488] Incremental R2 (full-covars): 0.02688 PGS R2 (no covariates): 0.02741 [0.02498, 0.02984] | age, sex, UKB array type, Genotype PCs | — |
PPM010020 | PGS001892 (portability-PLR_birth_weight) | PSS009388| European Ancestry| 11,255 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1913 [0.1734, 0.209] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010021 | PGS001892 (portability-PLR_birth_weight) | PSS009162| European Ancestry| 2,139 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1447 [0.1027, 0.1861] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010022 | PGS001892 (portability-PLR_birth_weight) | PSS008716| European Ancestry| 3,422 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1639 [0.131, 0.1964] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010023 | PGS001892 (portability-PLR_birth_weight) | PSS008490| Greater Middle Eastern Ancestry| 303 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1653 [0.0496, 0.2766] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010024 | PGS001892 (portability-PLR_birth_weight) | PSS008268| South Asian Ancestry| 1,505 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1064 [0.0559, 0.1565] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010025 | PGS001892 (portability-PLR_birth_weight) | PSS008046| East Asian Ancestry| 714 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1533 [0.0798, 0.2251] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010026 | PGS001892 (portability-PLR_birth_weight) | PSS007832| African Ancestry| 840 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.0983 [0.03, 0.1656] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010027 | PGS001892 (portability-PLR_birth_weight) | PSS008936| African Ancestry| 791 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1149 [0.0447, 0.1841] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011696 | PGS002105 (portability-ldpred2_birth_weight) | PSS009388| European Ancestry| 11,255 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.2001 [0.1823, 0.2178] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011697 | PGS002105 (portability-ldpred2_birth_weight) | PSS009162| European Ancestry| 2,139 individuals | PGP000263 | Privé F et al. Am J Hum Genet (2022) | Reported Trait: Birth weight | — | — | Partial Correlation (partial-r): 0.1536 [0.1118, 0.1949] | sex, age, birth date, deprivation index, 16 PCs | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods
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Participant Follow-up Time
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Sample Numbers
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Age of Study Participants
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Sample Ancestry
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Additional Ancestry Description
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Cohort(s)
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Additional Sample/Cohort Information
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PSS004896 | — | — | 1,708 individuals | — | African unspecified | — | UKB | — |
PSS004897 | — | — | 609 individuals | — | East Asian | — | UKB | — |
PSS004898 | — | — | 12,908 individuals | — | European | non-white British ancestry | UKB | — |
PSS004899 | — | — | 1,908 individuals | — | South Asian | — | UKB | — |
PSS004900 | — | — | 39,107 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS007832 | — | — | 840 individuals | — | African American or Afro-Caribbean | Carribean | UKB | — |
PSS008046 | — | — | 714 individuals | — | East Asian | China (East Asia) | UKB | — |
PSS008268 | — | — | 1,505 individuals | — | South Asian | India (South Asia) | UKB | — |
PSS008490 | — | — | 303 individuals | — | Greater Middle Eastern (Middle Eastern, North African or Persian) | Iran (Middle East) | UKB | — |
PSS008716 | — | — | 3,422 individuals | — | European | Italy (South Europe) | UKB | — |
PSS008936 | — | — | 791 individuals | — | African unspecified | Nigeria (West Africa) | UKB | — |
PSS009162 | — | — | 2,139 individuals | — | European | Poland (NE Europe) | UKB | — |
PSS009388 | — | — | 11,255 individuals | — | European | UK (+ Ireland) | UKB | — |
PSS010231 | — | — | 1,260 individuals, 39.0 % Male samples | Mean = 57.0 years Sd = 7.2 years | European | Ashkenazi | UKB | — |
PSS010315 | — | — | 838 individuals, 34.0 % Male samples | Mean = 50.5 years Sd = 7.6 years | African American or Afro-Caribbean | Caribbean | UKB | — |