Trait: bone quantitative ultrasound measurement

Experimental Factor Ontology (EFO) Information
Identifier EFO_0004514
Description A bone quantitative ultrasound measurement is the output of a an ultrasound process in which bones are assayed using ultrasound and information about bone density, cortical thickness, elasticity and microarchitecture may be returned.
Trait category
Other measurement
Synonyms 2 synonyms
  • bone quantitative ultrasound
  • broadband ultrasound attenuation

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS000951
(GBE_INI3144)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Heel Broadband ultrasound attenuation, direct entry bone quantitative ultrasound measurement 13,735
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000951/ScoringFiles/PGS000951.txt.gz
PGS000952
(GBE_INI3147)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Heel quantitative ultrasound index (QUI), direct entry bone quantitative ultrasound measurement 14,311
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000952/ScoringFiles/PGS000952.txt.gz
PGS000953
(GBE_INI4101)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Left heel broadband ultrasound attenuation bone quantitative ultrasound measurement 7,688
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000953/ScoringFiles/PGS000953.txt.gz
PGS000954
(GBE_INI4104)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Left heel quantitative ultrasound index (QUI), direct entry bone quantitative ultrasound measurement 9,272
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000954/ScoringFiles/PGS000954.txt.gz
PGS000955
(GBE_INI4120)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Right heel broadband ultrasound attenuation bone quantitative ultrasound measurement 7,069
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000955/ScoringFiles/PGS000955.txt.gz
PGS000956
(GBE_INI4123)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Right heel quantitative ultrasound index (QUI), direct entry bone quantitative ultrasound measurement 9,756
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000956/ScoringFiles/PGS000956.txt.gz
PGS003536
(cont-decay-log_heel_BUA)
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Heel Broadband ultrasound attenuation, direct entry bone quantitative ultrasound measurement 979,739
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003536/ScoringFiles/PGS003536.txt.gz
PGS004413
(X3144.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel Broadband ultrasound attenuation, direct entry bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004413/ScoringFiles/PGS004413.txt.gz
PGS004414
(X3147.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel quantitative ultrasound index (QUI), direct entry bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004414/ScoringFiles/PGS004414.txt.gz
PGS004417
(X4101.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel broadband ultrasound attenuation (left) bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004417/ScoringFiles/PGS004417.txt.gz
PGS004418
(X4104.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel quantitative ultrasound index (QUI), direct entry (left) bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004418/ScoringFiles/PGS004418.txt.gz
PGS004422
(X4120.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel broadband ultrasound attenuation (right) bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004422/ScoringFiles/PGS004422.txt.gz
PGS004423
(X4123.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
Heel quantitative ultrasound index (QUI), direct entry (right) bone quantitative ultrasound measurement 1,059,939
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004423/ScoringFiles/PGS004423.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM)
Evaluated Score PGS Sample Set ID
(PSS)
Performance Source Trait PGS Effect Sizes
(per SD change)
Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM007579 PGS000951
(GBE_INI3144)
PSS007226|
African Ancestry|
2,252 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry : 0.03865 [0.02946, 0.04783]
Incremental R2 (full-covars): 0.01472
PGS R2 (no covariates): 0.01564 [0.00966, 0.02163]
age, sex, UKB array type, Genotype PCs
PPM007580 PGS000951
(GBE_INI3144)
PSS007227|
East Asian Ancestry|
795 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry : 0.09355 [0.06728, 0.11982]
Incremental R2 (full-covars): 0.05152
PGS R2 (no covariates): 0.05375 [0.03296, 0.07454]
age, sex, UKB array type, Genotype PCs
PPM007581 PGS000951
(GBE_INI3144)
PSS007228|
European Ancestry|
12,376 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry : 0.1963 [0.18746, 0.20514]
Incremental R2 (full-covars): 0.11678
PGS R2 (no covariates): 0.11778 [0.11026, 0.1253]
age, sex, UKB array type, Genotype PCs
PPM007582 PGS000951
(GBE_INI3144)
PSS007229|
South Asian Ancestry|
2,312 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry : 0.09722 [0.08476, 0.10969]
Incremental R2 (full-covars): 0.05231
PGS R2 (no covariates): 0.05582 [0.04594, 0.06569]
age, sex, UKB array type, Genotype PCs
PPM007583 PGS000951
(GBE_INI3144)
PSS007230|
European Ancestry|
38,830 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry : 0.20634 [0.2009, 0.21179]
Incremental R2 (full-covars): 0.11895
PGS R2 (no covariates): 0.11837 [0.11379, 0.12295]
age, sex, UKB array type, Genotype PCs
PPM007584 PGS000952
(GBE_INI3147)
PSS007236|
African Ancestry|
2,253 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry : 0.03462 [0.02589, 0.04335]
Incremental R2 (full-covars): 0.01756
PGS R2 (no covariates): 0.01829 [0.01183, 0.02474]
age, sex, UKB array type, Genotype PCs
PPM007585 PGS000952
(GBE_INI3147)
PSS007237|
East Asian Ancestry|
795 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry : 0.09836 [0.07157, 0.12516]
Incremental R2 (full-covars): 0.06627
PGS R2 (no covariates): 0.06933 [0.04611, 0.09255]
age, sex, UKB array type, Genotype PCs
PPM007586 PGS000952
(GBE_INI3147)
PSS007238|
European Ancestry|
12,376 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry : 0.18809 [0.17935, 0.19684]
Incremental R2 (full-covars): 0.13505
PGS R2 (no covariates): 0.13677 [0.12885, 0.1447]
age, sex, UKB array type, Genotype PCs
PPM007587 PGS000952
(GBE_INI3147)
PSS007239|
South Asian Ancestry|
2,312 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry : 0.10193 [0.08923, 0.11462]
Incremental R2 (full-covars): 0.06757
PGS R2 (no covariates): 0.07119 [0.06022, 0.08216]
age, sex, UKB array type, Genotype PCs
PPM007588 PGS000952
(GBE_INI3147)
PSS007240|
European Ancestry|
38,834 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry : 0.1966 [0.19122, 0.20198]
Incremental R2 (full-covars): 0.1419
PGS R2 (no covariates): 0.14158 [0.13671, 0.14646]
age, sex, UKB array type, Genotype PCs
PPM007591 PGS000953
(GBE_INI4101)
PSS007278|
European Ancestry|
10,636 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (L) : 0.18344 [0.17475, 0.19212]
Incremental R2 (full-covars): 0.09737
PGS R2 (no covariates): 0.09704 [0.09006, 0.10403]
age, sex, UKB array type, Genotype PCs
PPM007589 PGS000953
(GBE_INI4101)
PSS007276|
African Ancestry|
3,559 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (L) : 0.03758 [0.02851, 0.04665]
Incremental R2 (full-covars): 0.00859
PGS R2 (no covariates): 0.00936 [0.0047, 0.01402]
age, sex, UKB array type, Genotype PCs
PPM007590 PGS000953
(GBE_INI4101)
PSS007277|
East Asian Ancestry|
781 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (L) Incremental R2 (full-covars): 0.07295
: 0.10345 [0.07612, 0.13077]
PGS R2 (no covariates): 0.07189 [0.0483, 0.09547]
age, sex, UKB array type, Genotype PCs
PPM007592 PGS000953
(GBE_INI4101)
PSS007279|
South Asian Ancestry|
5,043 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (L) : 0.08632 [0.07443, 0.0982]
Incremental R2 (full-covars): 0.04895
PGS R2 (no covariates): 0.04892 [0.03961, 0.05823]
age, sex, UKB array type, Genotype PCs
PPM007593 PGS000953
(GBE_INI4101)
PSS007280|
European Ancestry|
25,716 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (L) : 0.19239 [0.18705, 0.19774]
Incremental R2 (full-covars): 0.09654
PGS R2 (no covariates): 0.09575 [0.09152, 0.09997]
age, sex, UKB array type, Genotype PCs
PPM007594 PGS000954
(GBE_INI4104)
PSS007286|
African Ancestry|
3,560 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) : 0.02571 [0.01811, 0.0333]
Incremental R2 (full-covars): 0.00528
PGS R2 (no covariates): 0.00688 [0.00288, 0.01088]
age, sex, UKB array type, Genotype PCs
PPM007595 PGS000954
(GBE_INI4104)
PSS007287|
East Asian Ancestry|
781 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) : 0.10298 [0.0757, 0.13026]
Incremental R2 (full-covars): 0.08296
PGS R2 (no covariates): 0.082 [0.05708, 0.10691]
age, sex, UKB array type, Genotype PCs
PPM007596 PGS000954
(GBE_INI4104)
PSS007288|
European Ancestry|
10,636 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) : 0.17491 [0.16634, 0.18348]
Incremental R2 (full-covars): 0.11202
PGS R2 (no covariates): 0.11274 [0.10534, 0.12014]
age, sex, UKB array type, Genotype PCs
PPM007597 PGS000954
(GBE_INI4104)
PSS007289|
South Asian Ancestry|
5,043 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) : 0.08121 [0.06962, 0.0928]
Incremental R2 (full-covars): 0.05294
PGS R2 (no covariates): 0.05414 [0.0444, 0.06389]
age, sex, UKB array type, Genotype PCs
PPM007598 PGS000954
(GBE_INI4104)
PSS007290|
European Ancestry|
25,716 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) : 0.17984 [0.17459, 0.18509]
Incremental R2 (full-covars): 0.11708
PGS R2 (no covariates): 0.11589 [0.11135, 0.12043]
age, sex, UKB array type, Genotype PCs
PPM007599 PGS000955
(GBE_INI4120)
PSS007306|
African Ancestry|
3,591 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (R) : 0.03102 [0.02273, 0.03932]
Incremental R2 (full-covars): 0.0053
PGS R2 (no covariates): 0.00612 [0.00234, 0.0099]
age, sex, UKB array type, Genotype PCs
PPM007600 PGS000955
(GBE_INI4120)
PSS007307|
East Asian Ancestry|
782 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (R) : 0.1074 [0.07968, 0.13512]
Incremental R2 (full-covars): 0.06527
PGS R2 (no covariates): 0.06337 [0.04102, 0.08571]
age, sex, UKB array type, Genotype PCs
PPM007601 PGS000955
(GBE_INI4120)
PSS007308|
European Ancestry|
10,633 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (R) : 0.18118 [0.17253, 0.18984]
Incremental R2 (full-covars): 0.09282
PGS R2 (no covariates): 0.09341 [0.08653, 0.10029]
age, sex, UKB array type, Genotype PCs
PPM007602 PGS000955
(GBE_INI4120)
PSS007309|
South Asian Ancestry|
5,040 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (R) : 0.08322 [0.07151, 0.09493]
Incremental R2 (full-covars): 0.05145
PGS R2 (no covariates): 0.05095 [0.04147, 0.06044]
age, sex, UKB array type, Genotype PCs
PPM007603 PGS000955
(GBE_INI4120)
PSS007310|
European Ancestry|
25,727 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel broadband ultrasound attenuation (R) : 0.20708 [0.20164, 0.21253]
Incremental R2 (full-covars): 0.10115
PGS R2 (no covariates): 0.10011 [0.09582, 0.10441]
age, sex, UKB array type, Genotype PCs
PPM007604 PGS000956
(GBE_INI4123)
PSS007316|
African Ancestry|
3,592 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) : 0.02463 [0.01719, 0.03208]
Incremental R2 (full-covars): 0.00617
PGS R2 (no covariates): 0.00698 [0.00295, 0.01101]
age, sex, UKB array type, Genotype PCs
PPM007605 PGS000956
(GBE_INI4123)
PSS007317|
East Asian Ancestry|
782 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) : 0.09886 [0.07201, 0.12571]
Incremental R2 (full-covars): 0.07542
PGS R2 (no covariates): 0.07555 [0.05147, 0.09963]
age, sex, UKB array type, Genotype PCs
PPM007606 PGS000956
(GBE_INI4123)
PSS007318|
European Ancestry|
10,633 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) : 0.17521 [0.16663, 0.18378]
Incremental R2 (full-covars): 0.11145
PGS R2 (no covariates): 0.11271 [0.10531, 0.12011]
age, sex, UKB array type, Genotype PCs
PPM007607 PGS000956
(GBE_INI4123)
PSS007319|
South Asian Ancestry|
5,041 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) : 0.08263 [0.07095, 0.0943]
Incremental R2 (full-covars): 0.05817
PGS R2 (no covariates): 0.05816 [0.0481, 0.06821]
age, sex, UKB array type, Genotype PCs
PPM007608 PGS000956
(GBE_INI4123)
PSS007320|
European Ancestry|
25,728 individuals
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) : 0.19359 [0.18823, 0.19894]
Incremental R2 (full-covars): 0.1242
PGS R2 (no covariates): 0.12266 [0.11802, 0.1273]
age, sex, UKB array type, Genotype PCs
PPM017464 PGS003536
(cont-decay-log_heel_BUA)
PSS010900|
European Ancestry|
11,353 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.17 sex, age, deprivation index, PC1-16
PPM017548 PGS003536
(cont-decay-log_heel_BUA)
PSS010816|
European Ancestry|
2,146 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.17 sex, age, deprivation index, PC1-16
PPM017632 PGS003536
(cont-decay-log_heel_BUA)
PSS010648|
European Ancestry|
3,386 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.13 sex, age, deprivation index, PC1-16
PPM017716 PGS003536
(cont-decay-log_heel_BUA)
PSS010564|
Greater Middle Eastern Ancestry|
486 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.1 sex, age, deprivation index, PC1-16
PPM017968 PGS003536
(cont-decay-log_heel_BUA)
PSS010396|
East Asian Ancestry|
810 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.07 sex, age, deprivation index, PC1-16
PPM018136 PGS003536
(cont-decay-log_heel_BUA)
PSS010732|
African Ancestry|
1,395 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.02 sex, age, deprivation index, PC1-16
PPM017800 PGS003536
(cont-decay-log_heel_BUA)
PSS010228|
European Ancestry|
1,382 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.14 sex, age, deprivation index, PC1-16
PPM017884 PGS003536
(cont-decay-log_heel_BUA)
PSS010480|
South Asian Ancestry|
1,961 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.09 sex, age, deprivation index, PC1-16
PPM018052 PGS003536
(cont-decay-log_heel_BUA)
PSS010312|
African Ancestry|
791 individuals
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre
Reported Trait: Heel Broadband ultrasound attenuation, direct entry partial-R2: 0.01 sex, age, deprivation index, PC1-16
PPM020528 PGS004413
(X3144.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel Broadband ultrasound attenuation, direct entry PGS R2 (no covariates): 0.27085
PPM020529 PGS004414
(X3147.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry PGS R2 (no covariates): 0.30125
PPM020532 PGS004417
(X4101.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel broadband ultrasound attenuation (left) PGS R2 (no covariates): 0.21942
PPM020533 PGS004418
(X4104.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (left) PGS R2 (no covariates): 0.24743
PPM020537 PGS004422
(X4120.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel broadband ultrasound attenuation (right) PGS R2 (no covariates): 0.22006
PPM020538 PGS004423
(X4123.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (right) PGS R2 (no covariates): 0.24814

Evaluated Samples

PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS007228 12,376 individuals European non-white British ancestry UKB
PSS007229 2,312 individuals South Asian UKB
PSS007230 38,830 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS010396 810 individuals,
35.0 % Male samples
Mean = 51.9 years
Sd = 7.5 years
East Asian Chinese UKB
PSS007236 2,253 individuals African unspecified UKB
PSS007237 795 individuals East Asian UKB
PSS007238 12,376 individuals European non-white British ancestry UKB
PSS007239 2,312 individuals South Asian UKB
PSS007240 38,834 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS010816 2,146 individuals,
39.0 % Male samples
Mean = 54.3 years
Sd = 7.2 years
European Polish UKB
PSS010564 486 individuals,
65.0 % Male samples
Mean = 51.1 years
Sd = 7.6 years
Greater Middle Eastern (Middle Eastern, North African or Persian) Iranian UKB
PSS010312 791 individuals,
35.0 % Male samples
Mean = 52.2 years
Sd = 8.2 years
African American or Afro-Caribbean Caribbean UKB
PSS007276 3,559 individuals African unspecified UKB
PSS007277 781 individuals East Asian UKB
PSS007278 10,636 individuals European non-white British ancestry UKB
PSS007279 5,043 individuals South Asian UKB
PSS007280 25,716 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS007286 3,560 individuals African unspecified UKB
PSS007287 781 individuals East Asian UKB
PSS007288 10,636 individuals European non-white British ancestry UKB
PSS007289 5,043 individuals South Asian UKB
PSS007290 25,716 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS007306 3,591 individuals African unspecified UKB
PSS007307 782 individuals East Asian UKB
PSS007308 10,633 individuals European non-white British ancestry UKB
PSS007309 5,040 individuals South Asian UKB
PSS007310 25,727 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS010732 1,395 individuals,
49.0 % Male samples
Mean = 52.0 years
Sd = 8.1 years
African unspecified Nigerian UKB
PSS010480 1,961 individuals,
56.0 % Male samples
Mean = 52.7 years
Sd = 8.2 years
South Asian Indian UKB
PSS010228 1,382 individuals,
47.0 % Male samples
Mean = 57.7 years
Sd = 7.1 years
European Ashkenazi UKB
PSS007316 3,592 individuals African unspecified UKB
PSS007317 782 individuals East Asian UKB
PSS007318 10,633 individuals European non-white British ancestry UKB
PSS007319 5,041 individuals South Asian UKB
PSS007320 25,728 individuals European white British ancestry UKB Testing cohort (heldout set)
PSS011364 56,192 individuals European UKB
PSS010900 11,353 individuals,
46.0 % Male samples
Mean = 56.8 years
Sd = 7.8 years
European white British UKB
PSS010648 3,386 individuals,
46.0 % Male samples
Mean = 54.5 years
Sd = 8.2 years
European Italian UKB
PSS007226 2,252 individuals African unspecified UKB
PSS007227 795 individuals East Asian UKB