Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0004514 |
Description | A bone quantitative ultrasound measurement is the output of a an ultrasound process in which bones are assayed using ultrasound and information about bone density, cortical thickness, elasticity and microarchitecture may be returned. | Trait category |
Other measurement
|
Synonyms |
2 synonyms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS000951 (GBE_INI3144) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Heel Broadband ultrasound attenuation, direct entry | bone quantitative ultrasound measurement | 13,735 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000951/ScoringFiles/PGS000951.txt.gz |
PGS000952 (GBE_INI3147) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Heel quantitative ultrasound index (QUI), direct entry | bone quantitative ultrasound measurement | 14,311 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000952/ScoringFiles/PGS000952.txt.gz |
PGS000953 (GBE_INI4101) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Left heel broadband ultrasound attenuation | bone quantitative ultrasound measurement | 7,688 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000953/ScoringFiles/PGS000953.txt.gz |
PGS000954 (GBE_INI4104) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Left heel quantitative ultrasound index (QUI), direct entry | bone quantitative ultrasound measurement | 9,272 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000954/ScoringFiles/PGS000954.txt.gz |
PGS000955 (GBE_INI4120) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Right heel broadband ultrasound attenuation | bone quantitative ultrasound measurement | 7,069 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000955/ScoringFiles/PGS000955.txt.gz |
PGS000956 (GBE_INI4123) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Right heel quantitative ultrasound index (QUI), direct entry | bone quantitative ultrasound measurement | 9,756 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000956/ScoringFiles/PGS000956.txt.gz |
PGS003536 (cont-decay-log_heel_BUA) |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Heel Broadband ultrasound attenuation, direct entry | bone quantitative ultrasound measurement | 979,739 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003536/ScoringFiles/PGS003536.txt.gz |
PGS004413 (X3144.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel Broadband ultrasound attenuation, direct entry | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004413/ScoringFiles/PGS004413.txt.gz |
PGS004414 (X3147.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel quantitative ultrasound index (QUI), direct entry | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004414/ScoringFiles/PGS004414.txt.gz |
PGS004417 (X4101.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel broadband ultrasound attenuation (left) | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004417/ScoringFiles/PGS004417.txt.gz |
PGS004418 (X4104.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel quantitative ultrasound index (QUI), direct entry (left) | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004418/ScoringFiles/PGS004418.txt.gz |
PGS004422 (X4120.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel broadband ultrasound attenuation (right) | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004422/ScoringFiles/PGS004422.txt.gz |
PGS004423 (X4123.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Heel quantitative ultrasound index (QUI), direct entry (right) | bone quantitative ultrasound measurement | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004423/ScoringFiles/PGS004423.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM007579 | PGS000951 (GBE_INI3144) |
PSS007226| African Ancestry| 2,252 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | R²: 0.03865 [0.02946, 0.04783] Incremental R2 (full-covars): 0.01472 PGS R2 (no covariates): 0.01564 [0.00966, 0.02163] |
age, sex, UKB array type, Genotype PCs | — |
PPM007580 | PGS000951 (GBE_INI3144) |
PSS007227| East Asian Ancestry| 795 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | R²: 0.09355 [0.06728, 0.11982] Incremental R2 (full-covars): 0.05152 PGS R2 (no covariates): 0.05375 [0.03296, 0.07454] |
age, sex, UKB array type, Genotype PCs | — |
PPM007581 | PGS000951 (GBE_INI3144) |
PSS007228| European Ancestry| 12,376 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | R²: 0.1963 [0.18746, 0.20514] Incremental R2 (full-covars): 0.11678 PGS R2 (no covariates): 0.11778 [0.11026, 0.1253] |
age, sex, UKB array type, Genotype PCs | — |
PPM007582 | PGS000951 (GBE_INI3144) |
PSS007229| South Asian Ancestry| 2,312 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | R²: 0.09722 [0.08476, 0.10969] Incremental R2 (full-covars): 0.05231 PGS R2 (no covariates): 0.05582 [0.04594, 0.06569] |
age, sex, UKB array type, Genotype PCs | — |
PPM007583 | PGS000951 (GBE_INI3144) |
PSS007230| European Ancestry| 38,830 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | R²: 0.20634 [0.2009, 0.21179] Incremental R2 (full-covars): 0.11895 PGS R2 (no covariates): 0.11837 [0.11379, 0.12295] |
age, sex, UKB array type, Genotype PCs | — |
PPM007584 | PGS000952 (GBE_INI3147) |
PSS007236| African Ancestry| 2,253 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | R²: 0.03462 [0.02589, 0.04335] Incremental R2 (full-covars): 0.01756 PGS R2 (no covariates): 0.01829 [0.01183, 0.02474] |
age, sex, UKB array type, Genotype PCs | — |
PPM007585 | PGS000952 (GBE_INI3147) |
PSS007237| East Asian Ancestry| 795 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | R²: 0.09836 [0.07157, 0.12516] Incremental R2 (full-covars): 0.06627 PGS R2 (no covariates): 0.06933 [0.04611, 0.09255] |
age, sex, UKB array type, Genotype PCs | — |
PPM007586 | PGS000952 (GBE_INI3147) |
PSS007238| European Ancestry| 12,376 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | R²: 0.18809 [0.17935, 0.19684] Incremental R2 (full-covars): 0.13505 PGS R2 (no covariates): 0.13677 [0.12885, 0.1447] |
age, sex, UKB array type, Genotype PCs | — |
PPM007587 | PGS000952 (GBE_INI3147) |
PSS007239| South Asian Ancestry| 2,312 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | R²: 0.10193 [0.08923, 0.11462] Incremental R2 (full-covars): 0.06757 PGS R2 (no covariates): 0.07119 [0.06022, 0.08216] |
age, sex, UKB array type, Genotype PCs | — |
PPM007588 | PGS000952 (GBE_INI3147) |
PSS007240| European Ancestry| 38,834 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | R²: 0.1966 [0.19122, 0.20198] Incremental R2 (full-covars): 0.1419 PGS R2 (no covariates): 0.14158 [0.13671, 0.14646] |
age, sex, UKB array type, Genotype PCs | — |
PPM007591 | PGS000953 (GBE_INI4101) |
PSS007278| European Ancestry| 10,636 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (L) | — | — | R²: 0.18344 [0.17475, 0.19212] Incremental R2 (full-covars): 0.09737 PGS R2 (no covariates): 0.09704 [0.09006, 0.10403] |
age, sex, UKB array type, Genotype PCs | — |
PPM007589 | PGS000953 (GBE_INI4101) |
PSS007276| African Ancestry| 3,559 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (L) | — | — | R²: 0.03758 [0.02851, 0.04665] Incremental R2 (full-covars): 0.00859 PGS R2 (no covariates): 0.00936 [0.0047, 0.01402] |
age, sex, UKB array type, Genotype PCs | — |
PPM007590 | PGS000953 (GBE_INI4101) |
PSS007277| East Asian Ancestry| 781 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (L) | — | — | Incremental R2 (full-covars): 0.07295 R²: 0.10345 [0.07612, 0.13077] PGS R2 (no covariates): 0.07189 [0.0483, 0.09547] |
age, sex, UKB array type, Genotype PCs | — |
PPM007592 | PGS000953 (GBE_INI4101) |
PSS007279| South Asian Ancestry| 5,043 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (L) | — | — | R²: 0.08632 [0.07443, 0.0982] Incremental R2 (full-covars): 0.04895 PGS R2 (no covariates): 0.04892 [0.03961, 0.05823] |
age, sex, UKB array type, Genotype PCs | — |
PPM007593 | PGS000953 (GBE_INI4101) |
PSS007280| European Ancestry| 25,716 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (L) | — | — | R²: 0.19239 [0.18705, 0.19774] Incremental R2 (full-covars): 0.09654 PGS R2 (no covariates): 0.09575 [0.09152, 0.09997] |
age, sex, UKB array type, Genotype PCs | — |
PPM007594 | PGS000954 (GBE_INI4104) |
PSS007286| African Ancestry| 3,560 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) | — | — | R²: 0.02571 [0.01811, 0.0333] Incremental R2 (full-covars): 0.00528 PGS R2 (no covariates): 0.00688 [0.00288, 0.01088] |
age, sex, UKB array type, Genotype PCs | — |
PPM007595 | PGS000954 (GBE_INI4104) |
PSS007287| East Asian Ancestry| 781 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) | — | — | R²: 0.10298 [0.0757, 0.13026] Incremental R2 (full-covars): 0.08296 PGS R2 (no covariates): 0.082 [0.05708, 0.10691] |
age, sex, UKB array type, Genotype PCs | — |
PPM007596 | PGS000954 (GBE_INI4104) |
PSS007288| European Ancestry| 10,636 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) | — | — | R²: 0.17491 [0.16634, 0.18348] Incremental R2 (full-covars): 0.11202 PGS R2 (no covariates): 0.11274 [0.10534, 0.12014] |
age, sex, UKB array type, Genotype PCs | — |
PPM007597 | PGS000954 (GBE_INI4104) |
PSS007289| South Asian Ancestry| 5,043 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) | — | — | R²: 0.08121 [0.06962, 0.0928] Incremental R2 (full-covars): 0.05294 PGS R2 (no covariates): 0.05414 [0.0444, 0.06389] |
age, sex, UKB array type, Genotype PCs | — |
PPM007598 | PGS000954 (GBE_INI4104) |
PSS007290| European Ancestry| 25,716 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (L) | — | — | R²: 0.17984 [0.17459, 0.18509] Incremental R2 (full-covars): 0.11708 PGS R2 (no covariates): 0.11589 [0.11135, 0.12043] |
age, sex, UKB array type, Genotype PCs | — |
PPM007599 | PGS000955 (GBE_INI4120) |
PSS007306| African Ancestry| 3,591 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (R) | — | — | R²: 0.03102 [0.02273, 0.03932] Incremental R2 (full-covars): 0.0053 PGS R2 (no covariates): 0.00612 [0.00234, 0.0099] |
age, sex, UKB array type, Genotype PCs | — |
PPM007600 | PGS000955 (GBE_INI4120) |
PSS007307| East Asian Ancestry| 782 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (R) | — | — | R²: 0.1074 [0.07968, 0.13512] Incremental R2 (full-covars): 0.06527 PGS R2 (no covariates): 0.06337 [0.04102, 0.08571] |
age, sex, UKB array type, Genotype PCs | — |
PPM007601 | PGS000955 (GBE_INI4120) |
PSS007308| European Ancestry| 10,633 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (R) | — | — | R²: 0.18118 [0.17253, 0.18984] Incremental R2 (full-covars): 0.09282 PGS R2 (no covariates): 0.09341 [0.08653, 0.10029] |
age, sex, UKB array type, Genotype PCs | — |
PPM007602 | PGS000955 (GBE_INI4120) |
PSS007309| South Asian Ancestry| 5,040 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (R) | — | — | R²: 0.08322 [0.07151, 0.09493] Incremental R2 (full-covars): 0.05145 PGS R2 (no covariates): 0.05095 [0.04147, 0.06044] |
age, sex, UKB array type, Genotype PCs | — |
PPM007603 | PGS000955 (GBE_INI4120) |
PSS007310| European Ancestry| 25,727 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel broadband ultrasound attenuation (R) | — | — | R²: 0.20708 [0.20164, 0.21253] Incremental R2 (full-covars): 0.10115 PGS R2 (no covariates): 0.10011 [0.09582, 0.10441] |
age, sex, UKB array type, Genotype PCs | — |
PPM007604 | PGS000956 (GBE_INI4123) |
PSS007316| African Ancestry| 3,592 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) | — | — | R²: 0.02463 [0.01719, 0.03208] Incremental R2 (full-covars): 0.00617 PGS R2 (no covariates): 0.00698 [0.00295, 0.01101] |
age, sex, UKB array type, Genotype PCs | — |
PPM007605 | PGS000956 (GBE_INI4123) |
PSS007317| East Asian Ancestry| 782 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) | — | — | R²: 0.09886 [0.07201, 0.12571] Incremental R2 (full-covars): 0.07542 PGS R2 (no covariates): 0.07555 [0.05147, 0.09963] |
age, sex, UKB array type, Genotype PCs | — |
PPM007606 | PGS000956 (GBE_INI4123) |
PSS007318| European Ancestry| 10,633 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) | — | — | R²: 0.17521 [0.16663, 0.18378] Incremental R2 (full-covars): 0.11145 PGS R2 (no covariates): 0.11271 [0.10531, 0.12011] |
age, sex, UKB array type, Genotype PCs | — |
PPM007607 | PGS000956 (GBE_INI4123) |
PSS007319| South Asian Ancestry| 5,041 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) | — | — | R²: 0.08263 [0.07095, 0.0943] Incremental R2 (full-covars): 0.05817 PGS R2 (no covariates): 0.05816 [0.0481, 0.06821] |
age, sex, UKB array type, Genotype PCs | — |
PPM007608 | PGS000956 (GBE_INI4123) |
PSS007320| European Ancestry| 25,728 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (R) | — | — | R²: 0.19359 [0.18823, 0.19894] Incremental R2 (full-covars): 0.1242 PGS R2 (no covariates): 0.12266 [0.11802, 0.1273] |
age, sex, UKB array type, Genotype PCs | — |
PPM017464 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010900| European Ancestry| 11,353 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.17 | sex, age, deprivation index, PC1-16 | — |
PPM017548 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010816| European Ancestry| 2,146 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.17 | sex, age, deprivation index, PC1-16 | — |
PPM017632 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010648| European Ancestry| 3,386 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.13 | sex, age, deprivation index, PC1-16 | — |
PPM017716 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010564| Greater Middle Eastern Ancestry| 486 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.1 | sex, age, deprivation index, PC1-16 | — |
PPM017968 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010396| East Asian Ancestry| 810 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.07 | sex, age, deprivation index, PC1-16 | — |
PPM018136 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010732| African Ancestry| 1,395 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.02 | sex, age, deprivation index, PC1-16 | — |
PPM017800 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010228| European Ancestry| 1,382 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.14 | sex, age, deprivation index, PC1-16 | — |
PPM017884 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010480| South Asian Ancestry| 1,961 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.09 | sex, age, deprivation index, PC1-16 | — |
PPM018052 | PGS003536 (cont-decay-log_heel_BUA) |
PSS010312| African Ancestry| 791 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | partial-R2: 0.01 | sex, age, deprivation index, PC1-16 | — |
PPM020528 | PGS004413 (X3144.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel Broadband ultrasound attenuation, direct entry | — | — | PGS R2 (no covariates): 0.27085 | — | — |
PPM020529 | PGS004414 (X3147.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry | — | — | PGS R2 (no covariates): 0.30125 | — | — |
PPM020532 | PGS004417 (X4101.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel broadband ultrasound attenuation (left) | — | — | PGS R2 (no covariates): 0.21942 | — | — |
PPM020533 | PGS004418 (X4104.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (left) | — | — | PGS R2 (no covariates): 0.24743 | — | — |
PPM020537 | PGS004422 (X4120.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel broadband ultrasound attenuation (right) | — | — | PGS R2 (no covariates): 0.22006 | — | — |
PPM020538 | PGS004423 (X4123.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Heel quantitative ultrasound index (QUI), direct entry (right) | — | — | PGS R2 (no covariates): 0.24814 | — | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS007228 | — | — | 12,376 individuals | — | European | non-white British ancestry | UKB | — |
PSS007229 | — | — | 2,312 individuals | — | South Asian | — | UKB | — |
PSS007230 | — | — | 38,830 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS010396 | — | — | 810 individuals, 35.0 % Male samples |
Mean = 51.9 years Sd = 7.5 years |
East Asian | Chinese | UKB | — |
PSS007236 | — | — | 2,253 individuals | — | African unspecified | — | UKB | — |
PSS007237 | — | — | 795 individuals | — | East Asian | — | UKB | — |
PSS007238 | — | — | 12,376 individuals | — | European | non-white British ancestry | UKB | — |
PSS007239 | — | — | 2,312 individuals | — | South Asian | — | UKB | — |
PSS007240 | — | — | 38,834 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS010816 | — | — | 2,146 individuals, 39.0 % Male samples |
Mean = 54.3 years Sd = 7.2 years |
European | Polish | UKB | — |
PSS010564 | — | — | 486 individuals, 65.0 % Male samples |
Mean = 51.1 years Sd = 7.6 years |
Greater Middle Eastern (Middle Eastern, North African or Persian) | Iranian | UKB | — |
PSS010312 | — | — | 791 individuals, 35.0 % Male samples |
Mean = 52.2 years Sd = 8.2 years |
African American or Afro-Caribbean | Caribbean | UKB | — |
PSS007276 | — | — | 3,559 individuals | — | African unspecified | — | UKB | — |
PSS007277 | — | — | 781 individuals | — | East Asian | — | UKB | — |
PSS007278 | — | — | 10,636 individuals | — | European | non-white British ancestry | UKB | — |
PSS007279 | — | — | 5,043 individuals | — | South Asian | — | UKB | — |
PSS007280 | — | — | 25,716 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS007286 | — | — | 3,560 individuals | — | African unspecified | — | UKB | — |
PSS007287 | — | — | 781 individuals | — | East Asian | — | UKB | — |
PSS007288 | — | — | 10,636 individuals | — | European | non-white British ancestry | UKB | — |
PSS007289 | — | — | 5,043 individuals | — | South Asian | — | UKB | — |
PSS007290 | — | — | 25,716 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS007306 | — | — | 3,591 individuals | — | African unspecified | — | UKB | — |
PSS007307 | — | — | 782 individuals | — | East Asian | — | UKB | — |
PSS007308 | — | — | 10,633 individuals | — | European | non-white British ancestry | UKB | — |
PSS007309 | — | — | 5,040 individuals | — | South Asian | — | UKB | — |
PSS007310 | — | — | 25,727 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS010732 | — | — | 1,395 individuals, 49.0 % Male samples |
Mean = 52.0 years Sd = 8.1 years |
African unspecified | Nigerian | UKB | — |
PSS010480 | — | — | 1,961 individuals, 56.0 % Male samples |
Mean = 52.7 years Sd = 8.2 years |
South Asian | Indian | UKB | — |
PSS010228 | — | — | 1,382 individuals, 47.0 % Male samples |
Mean = 57.7 years Sd = 7.1 years |
European | Ashkenazi | UKB | — |
PSS007316 | — | — | 3,592 individuals | — | African unspecified | — | UKB | — |
PSS007317 | — | — | 782 individuals | — | East Asian | — | UKB | — |
PSS007318 | — | — | 10,633 individuals | — | European | non-white British ancestry | UKB | — |
PSS007319 | — | — | 5,041 individuals | — | South Asian | — | UKB | — |
PSS007320 | — | — | 25,728 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS011364 | — | — | 56,192 individuals | — | European | — | UKB | — |
PSS010900 | — | — | 11,353 individuals, 46.0 % Male samples |
Mean = 56.8 years Sd = 7.8 years |
European | white British | UKB | — |
PSS010648 | — | — | 3,386 individuals, 46.0 % Male samples |
Mean = 54.5 years Sd = 8.2 years |
European | Italian | UKB | — |
PSS007226 | — | — | 2,252 individuals | — | African unspecified | — | UKB | — |
PSS007227 | — | — | 795 individuals | — | East Asian | — | UKB | — |