Trait: gestational diabetes

Experimental Factor Ontology (EFO) Information
Identifier EFO_0004593
Description Carbohydrate intolerance first diagnosed during pregnancy. [NCIT: P378]
Trait categories
Digestive system disorder
Metabolic disorder
Synonyms 5 synonyms
  • GDM
  • diabetes in pregnancy
  • gestational diabetes
  • gestational diabetes mellitus
  • maternal gestational diabetes mellitus
Mapped terms 11 mapped terms
  • DOID:11714
  • ICD10:O24
  • MEDGEN:38815
  • MESH:D016640
  • MONDO:0005406
  • MedDRA:10018209
  • NCIT:C34942
  • NCIt:C34942
  • SCTID:11687002
  • SNOMEDCT:11687002
  • UMLS:C0085207

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002256
(GRS4_GDM)
 PGP000282 |
Wu Q et al. Diabetol Metab Syndr (2022)
 Gestational diabetes mellitus in early pregnancy gestational diabetes 4
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002256/ScoringFiles/PGS002256.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM012834 PGS002256
(GRS4_GDM)
 PSS009573|
East Asian Ancestry|
985 individuals
 PGP000282 |
Wu Q et al. Diabetol Metab Syndr (2022)
 Reported Trait: Gestational diabetes mellitus in early pregnancy — AUROC: 0.62 [0.573, 0.667] — — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS009573 — —
[
  • 191 cases
  • , 794 controls
]
,
0.0 % Male samples
 — East Asian
(Chinese)		 — NR —