Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0009599 |
Description | Quantification of whether an individual feels or felt emotionally hurt. | Trait category |
Other measurement
|
Mapped term | PMID:29500382 |
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS001016 (GBE_BIN1950) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Sensitivity / hurt feelings | feeling emotionally hurt measurement | 7,922 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001016/ScoringFiles/PGS001016.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM007843 | PGS001016 (GBE_BIN1950) |
PSS003637| African Ancestry| 6,118 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Sensitivity / hurt feelings | — | AUROC: 0.59163 [0.57735, 0.60591] | R²: 0.0326 Incremental AUROC (full-covars): -0.01552 PGS R2 (no covariates): 7e-05 PGS AUROC (no covariates): 0.49648 [0.48187, 0.5111] |
age, sex, UKB array type, Genotype PCs | Full Model & PGS R2 is estimated using Nagelkerke's method |
PPM007844 | PGS001016 (GBE_BIN1950) |
PSS003638| East Asian Ancestry| 1,534 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Sensitivity / hurt feelings | — | AUROC: 0.61857 [0.59048, 0.64665] | R²: 0.06515 Incremental AUROC (full-covars): 0.00123 PGS R2 (no covariates): 0.00285 PGS AUROC (no covariates): 0.52442 [0.49546, 0.55337] |
age, sex, UKB array type, Genotype PCs | Full Model & PGS R2 is estimated using Nagelkerke's method |
PPM007845 | PGS001016 (GBE_BIN1950) |
PSS003639| European Ancestry| 24,064 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Sensitivity / hurt feelings | — | AUROC: 0.60838 [0.60128, 0.61549] | R²: 0.04732 Incremental AUROC (full-covars): 0.01171 PGS R2 (no covariates): 0.00998 PGS AUROC (no covariates): 0.54753 [0.54024, 0.55481] |
age, sex, UKB array type, Genotype PCs | Full Model & PGS R2 is estimated using Nagelkerke's method |
PPM007846 | PGS001016 (GBE_BIN1950) |
PSS003640| South Asian Ancestry| 7,159 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Sensitivity / hurt feelings | — | AUROC: 0.60244 [0.58913, 0.61576] | R²: 0.03988 Incremental AUROC (full-covars): 0.00657 PGS R2 (no covariates): 0.00436 PGS AUROC (no covariates): 0.53424 [0.5206, 0.54787] |
age, sex, UKB array type, Genotype PCs | Full Model & PGS R2 is estimated using Nagelkerke's method |
PPM007847 | PGS001016 (GBE_BIN1950) |
PSS003641| European Ancestry| 65,709 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Sensitivity / hurt feelings | — | AUROC: 0.62016 [0.61586, 0.62446] | R²: 0.0571 Incremental AUROC (full-covars): 0.01553 PGS R2 (no covariates): 0.00873 PGS AUROC (no covariates): 0.54593 [0.5415, 0.55036] |
age, sex, UKB array type, Genotype PCs | Full Model & PGS R2 is estimated using Nagelkerke's method |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS003637 | — | — | [
|
— | African unspecified | — | UKB | — |
PSS003638 | — | — | [
|
— | East Asian | — | UKB | — |
PSS003639 | — | — | [
|
— | European | non-white British ancestry | UKB | — |
PSS003640 | — | — | [
|
— | South Asian | — | UKB | — |
PSS003641 | — | — | [
|
— | European | white British ancestry | UKB | Testing cohort (heldout set) |