Trait: Nasal Cavity Polyp

Experimental Factor Ontology (EFO) Information
Identifier EFO_1000391
Description A soft and painless polypoid mass that arises from the mucosa in the nasal cavity. It is usually the...  result of an inflammatory process. It may recur following surgical resection. [NCIT: C3256]Show more
Trait category
Other disease
Synonyms 4 synonyms
  • nasal cavity polyp
  • nasal polyp
  • polyp of nasal cavity
  • polyp of the nasal cavity
Mapped terms 13 mapped terms
  • ICD10:J33
  • ICD9:471.0
  • ICD9:471.9
  • MEDGEN:6524
  • MESH:D009298
  • MONDO:0006314
  • MedDRA:10028754
  • MedDRA:10028756
  • MedDRA:10036138
  • NCIT:C3256
  • NCIt:C3256
  • SCTID:52756005
  • UMLS:C0027430

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
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Polygenic Score ID & Name
PGS Publication ID (PGP)
Reported Trait
Mapped Trait(s) (Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS004465
(disease.J33.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
J33 (Nasal polyp)Nasal Cavity Polyp1,059,939
-
D
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004465/ScoringFiles/PGS004465.txt.gz
PGS004535
(meta.J33.score)
PGP000561 |
Jung H et al. Commun Biol (2024)
J33 (Nasal polyp)Nasal Cavity Polyp1,059,939
-
D
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004535/ScoringFiles/PGS004535.txt.gz
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Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

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PGS Performance
Metric ID (PPM)
Evaluated Score
PGS Sample Set ID
(PSS)
Performance Source
Trait
PGS Effect Sizes
(per SD change)
Classification Metrics
Other Metrics
Covariates Included in the Model
PGS Performance:
Other Relevant Information
PPM020580PGS004465
(disease.J33.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: J33 (Nasal polyp)OR: 1.3496————
PPM020650PGS004535
(meta.J33.score)
PSS011364|
European Ancestry|
56,192 individuals
PGP000561 |
Jung H et al. Commun Biol (2024)
Reported Trait: J33 (Nasal polyp)OR: 1.60067————
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Evaluated Samples

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PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods
Participant Follow-up Time
Sample Numbers
Age of Study Participants
Sample Ancestry
Additional Ancestry Description
Cohort(s)
Additional Sample/Cohort Information
PSS011364——56,192 individuals—European—UKB—
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