Trait: alcohol-induced mental disorder

Trait Information
Identifier MONDO_0002326
Trait category
Neurological disorder
Mapped terms 5 mapped terms
  • DOID:251
  • ICD9:291.8
  • ICD9:291.89
  • MEDGEN:1705315
  • UMLS:C5200920

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004449
(disease.F10.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 F10 (Mental and behavioural disorders due to use of alcohol) alcohol-induced mental disorder 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004449/ScoringFiles/PGS004449.txt.gz
PGS004519
(meta.F10.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 F10 (Mental and behavioural disorders due to use of alcohol) alcohol-induced mental disorder 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004519/ScoringFiles/PGS004519.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM020564 PGS004449
(disease.F10.score)
 PSS011364|
European Ancestry|
56,192 individuals
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Reported Trait: F10 (Mental and behavioural disorders due to use of alcohol) OR: 1.17947 — — — —
PPM020634 PGS004519
(meta.F10.score)
 PSS011364|
European Ancestry|
56,192 individuals
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Reported Trait: F10 (Mental and behavioural disorders due to use of alcohol) OR: 1.30179 — — — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011364 — — 56,192 individuals — European — UKB —