Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000302
(GRS962_DBP)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Diastolic blood pressure diastolic blood pressure 962
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000302/ScoringFiles/PGS000302.txt.gz
PGS000303
(GRS253_eGFR)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Estimated glomerular filtration rate glomerular filtration rate 253
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000303/ScoringFiles/PGS000303.txt.gz
PGS000304
(GRS43_HbA1c)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 HbA1c HbA1c measurement 43
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000304/ScoringFiles/PGS000304.txt.gz
PGS000305
(GRS31_FG)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Fasting glucose fasting blood glucose measurement 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000305/ScoringFiles/PGS000305.txt.gz
PGS000306
(GRS19_FGadjBMI)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Fasting glucose (body mass index adjusted) BMI-adjusted fasting blood glucose measurement 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000306/ScoringFiles/PGS000306.txt.gz
PGS000307
(GRS12_FI)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Fasting insulin fasting blood insulin measurement 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000307/ScoringFiles/PGS000307.txt.gz
PGS000308
(GRS12_FIadjBMI)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Fasting insulin (body mass index adjusted) BMI-adjusted fasting blood insulin measurement 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000308/ScoringFiles/PGS000308.txt.gz
PGS000309
(GRS247_HDL)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 HDL cholesterol high density lipoprotein cholesterol measurement 247
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000309/ScoringFiles/PGS000309.txt.gz
PGS000310
(GRS194_LDL)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 LDL cholesterol low density lipoprotein cholesterol measurement 194
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000310/ScoringFiles/PGS000310.txt.gz
PGS000311
(GRS234_TC)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Total cholesterol total cholesterol measurement 234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000311/ScoringFiles/PGS000311.txt.gz
PGS000312
(GRS190_TG)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Triglycerides triglyceride measurement 190
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000312/ScoringFiles/PGS000312.txt.gz
PGS000313
(GRS49_Lp(a))
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Lipoprotein A lipoprotein A measurement 49
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000313/ScoringFiles/PGS000313.txt.gz
PGS000314
(GRS77_CRP)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 C-reactive protein C-reactive protein measurement 77
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000314/ScoringFiles/PGS000314.txt.gz
PGS000315
(GRS7_lgE)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Immunoglobulin E (IgE) serum IgE measurement 7
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000315/ScoringFiles/PGS000315.txt.gz
PGS000316
(GRS42_Coeliac)
 PGP000093 |
Sharp SA et al. Aliment Pharmacol Ther (2020)
 Coeliac disease celiac disease 42
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000316/ScoringFiles/PGS000316.txt.gz
PGS000317
(PRS180)
 PGP000094 |
Shieh Y et al. J Natl Cancer Inst (2020)
 Breast cancer breast carcinoma 180
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000317/ScoringFiles/PGS000317.txt.gz
PGS000318
(cPRS_F)
 PGP000095 |
Meisner A et al. Am J Hum Genet (2020)
 All-cause mortality (female) age at death,
female		 4,122
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000318/ScoringFiles/PGS000318.txt.gz
PGS000319
(cPRS_M)
 PGP000095 |
Meisner A et al. Am J Hum Genet (2020)
 All-cause mortality (male) age at death,
male		 4,092
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000319/ScoringFiles/PGS000319.txt.gz
PGS000320
(PRS_BMI)
 PGP000096 |
Chami N et al. PLoS Med (2020)
 Body mass index (BMI) body mass index 263,640
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000320/ScoringFiles/PGS000320.txt.gz
PGS000321
(snpnet_Testosterone_combined)
 PGP000097 |
Flynn E et al. Eur J Hum Genet (2020)
 Serum testosterone levels testosterone measurement 7,319
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000321/ScoringFiles/PGS000321.txt.gz
PGS000322
(snpnet_Testosterone_female-specific)
 PGP000097 |
Flynn E et al. Eur J Hum Genet (2020)
 Serum testosterone levels in females testosterone measurement,
female		 7,168
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000322/ScoringFiles/PGS000322.txt.gz
PGS000323
(snpnet_Testosterone_male-specific)
 PGP000097 |
Flynn E et al. Eur J Hum Genet (2020)
 Serum testosterone levels in males testosterone measurement,
male		 8,235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000323/ScoringFiles/PGS000323.txt.gz
PGS000324
(GRS-JIA-ERA-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Enthesitis-related Juvenile Idiophatic Arthritis enthesitis-related juvenile idiopathic arthritis 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000324/ScoringFiles/PGS000324.txt.gz
PGS000325
(GRS-JIA-Oli-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Oligoarthritis Juvenile Idiophatic Arthritis oligoarticular juvenile idiopathic arthritis 21
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000325/ScoringFiles/PGS000325.txt.gz
PGS000326
(GRS-JIA-RFN-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Rheumatoid-factor-negative Polyarthritis (Juvenile Idiophatic Arthritis) polyarticular juvenile idiopathic arthritis, rheumatoid factor negative 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000326/ScoringFiles/PGS000326.txt.gz
PGS000327
(ASD2019)
 PGP000098 |
Grove J et al. Nat Genet (2019)
 Autism spectrum disorder autism spectrum disorder 35,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000327/ScoringFiles/PGS000327.txt.gz
PGS000328
(GRS_SLE)
 PGP000099 |
Reid S et al. Ann Rheum Dis (2019)
 Systemic lupus erythematosus systemic lupus erythematosus 57
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000328/ScoringFiles/PGS000328.txt.gz
PGS000329
(PRS_CHD)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Coronary heart disease coronary artery disease 6,423,165
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000329/ScoringFiles/PGS000329.txt.gz
PGS000330
(PRS_T2D)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 6,437,380
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000330/ScoringFiles/PGS000330.txt.gz
PGS000331
(PRS_AF)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Atrial fibrillation atrial fibrillation 6,183,494
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000331/ScoringFiles/PGS000331.txt.gz
PGS000332
(PRS_BC)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Breast cancer breast carcinoma 6,390,808
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000332/ScoringFiles/PGS000332.txt.gz
PGS000333
(PRS_PC)
 PGP000100 |
Mars N et al. Nat Med (2020)
 Prostate cancer prostate carcinoma 6,606,785
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000333/ScoringFiles/PGS000333.txt.gz
PGS000334
(GRSfull_22)
 PGP000101 |
Zhang Q et al. Nat Commun (2020)
 Late-onset Alzheimer’s disease late-onset Alzheimer's disease 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000334/ScoringFiles/PGS000334.txt.gz
PGS000335
(BC_PRSCS)
 PGP000102 |
Mars N et al. Nat Commun (2020)
 Breast cancer breast carcinoma 1,079,089
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000335/ScoringFiles/PGS000335.txt.gz
PGS000336
(GRS313_Chron)
 PGP000103 |
Maukonen M et al. J Biol Rhythms (2020)
 Chronotype chronotype measurement 313
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000336/ScoringFiles/PGS000336.txt.gz
PGS000337
(MetaPRS_CAD)
 PGP000104 |
Koyama S et al. Nat Genet (2020)
 Coronary artery disease coronary artery disease 75,028
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000337/ScoringFiles/PGS000337.txt.gz - Check Terms/Licenses
PGS000338
(GRS97_AF)
 PGP000105 |
Kloosterman M et al. Eur J Heart Fail (2020)
 Atrial fibrillation atrial fibrillation 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000338/ScoringFiles/PGS000338.txt.gz
PGS000339
(PRS22_CM)
 PGP000106 |
Law MH et al. Hum Mol Genet (2020)
 Cutaneous melanoma cutaneous melanoma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000339/ScoringFiles/PGS000339.txt.gz
PGS000340
(LDL-Cpsp)
 PGP000107 |
Trinder M et al. Circ Genom Precis Med (2020)
 LDL cholesterol low density lipoprotein cholesterol measurement 28
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000340/ScoringFiles/PGS000340.txt.gz
PGS000341
(GRS33_SSc)
 PGP000110 |
Bossini-Castillo L et al. Ann Rheum Dis (2020)
 Systemic sclerosis systemic scleroderma 33
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000341/ScoringFiles/PGS000341.txt.gz
PGS000342
(wGRS_PsA)
 PGP000111 |
Smith MP et al. J Psoriasis Psoriatic Arthritis (2020)
 Psoriatic arthritis psoriatic arthritis 11
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000342/ScoringFiles/PGS000342.txt.gz
PGS000343
(wGRS_PsA_HLA)
 PGP000111 |
Smith MP et al. J Psoriasis Psoriatic Arthritis (2020)
 Psoriatic arthritis psoriatic arthritis 5
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000343/ScoringFiles/PGS000343.txt.gz
PGS000344
(PRS287_BC)
 PGP000112 |
Ho WK et al. Nat Commun (2020)
 Breast cancer breast carcinoma 287
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000344/ScoringFiles/PGS000344.txt.gz
PGS000345
(PRS229_BC)
 PGP000112 |
Ho WK et al. Nat Commun (2020)
 Breast cancer breast carcinoma 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000345/ScoringFiles/PGS000345.txt.gz
PGS000346
(PRS287_ERneg)
 PGP000112 |
Ho WK et al. Nat Commun (2020)
 Estrogen receptor negative breast cancer estrogen-receptor negative breast cancer 287
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000346/ScoringFiles/PGS000346.txt.gz
PGS000347
(PRS287_ERpos)
 PGP000112 |
Ho WK et al. Nat Commun (2020)
 Estrogen receptor positive breast cancer estrogen-receptor positive breast cancer 287
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000347/ScoringFiles/PGS000347.txt.gz
PGS000348
(PRS_PrCa)
 PGP000113 |
Black MH et al. Prostate (2020)
 Prostate cancer prostate carcinoma 72
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000348/ScoringFiles/PGS000348.txt.gz - Check Terms/Licenses
PGS000349
(PRS70_CAD)
 PGP000114 |
Pechlivanis S et al. BMC Med Genet (2020)
 Coronary artery disease coronary artery disease 70
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000349/ScoringFiles/PGS000349.txt.gz
PGS000350
(GRS12_POAG)
 PGP000115 |
Fan BJ et al. JAMA Ophthalmol (2019)
 Primary open-angle glaucoma open-angle glaucoma 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000350/ScoringFiles/PGS000350.txt.gz
PGS000351
(PRS_EOC)
 PGP000117 |
Barnes DR et al. Genet Med (2020)
 Invasive epithelial ovarian cancer ovarian carcinoma 30
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000351/ScoringFiles/PGS000351.txt.gz
Showing 301 to 350 of 4735 rows