Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000202
(PROB_ALC_FT12)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Problematic alcohol use alcohol dependence measurement 1,083,002
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000202/ScoringFiles/PGS000202.txt.gz
PGS000203
(GSCAN_DPW_COGA)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Alcohol consumption (drinks per week) alcohol consumption measurement 1,110,910
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000203/ScoringFiles/PGS000203.txt.gz
PGS000204
(GSCAN_DPW_FT12)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Alcohol consumption (drinks per week) alcohol consumption measurement 1,099,480
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000204/ScoringFiles/PGS000204.txt.gz
PGS000205
(RISK_PC_COGA)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Risk-taking tendency (4-domain principal component model) risk-taking behaviour 1,110,737
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000205/ScoringFiles/PGS000205.txt.gz
PGS000206
(RISK_PC_FT12)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Risk-taking tendency (4-domain principal component model) risk-taking behaviour 1,098,765
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000206/ScoringFiles/PGS000206.txt.gz
PGS000207
(TC10_Ohio)
 PGP000085 |
Liyanarachchi S et al. Proc Natl Acad Sci U S A (2020)
 Thyroid cancer thyroid carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000207/ScoringFiles/PGS000207.txt.gz
PGS000208
(TC10_Iceland)
 PGP000085 |
Liyanarachchi S et al. Proc Natl Acad Sci U S A (2020)
 Thyroid cancer thyroid carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000208/ScoringFiles/PGS000208.txt.gz
PGS000209
(TC10_UKB)
 PGP000085 |
Liyanarachchi S et al. Proc Natl Acad Sci U S A (2020)
 Thyroid cancer thyroid carcinoma 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000209/ScoringFiles/PGS000209.txt.gz
PGS000210
(LF279)
 PGP000086 |
Shrine N et al. Nat Genet (2019)
 Lung function (FEV1/FVC) FEV/FVC ratio 279
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000210/ScoringFiles/PGS000210.txt.gz
PGS000211
(PD19)
 PGP000087 |
Pihlstrøm L et al. Mov Disord (2016)
 Parkinson's disease Parkinson disease 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000211/ScoringFiles/PGS000211.txt.gz
PGS000212
(PRS330_LumA)
 PGP000088 |
Zhang H et al. Nat Genet (2020)
 Breast cancer intrinsic-like subtype (luminal A-like) luminal A breast carcinoma 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000212/ScoringFiles/PGS000212.txt.gz
PGS000213
(PRS330_LumBHER2neg)
 PGP000088 |
Zhang H et al. Nat Genet (2020)
 Breast cancer intrinsic-like subtype (luminal B/HER2-negative-like) HER2 negative breast carcinoma 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000213/ScoringFiles/PGS000213.txt.gz
PGS000214
(PRS330_LumB)
 PGP000088 |
Zhang H et al. Nat Genet (2020)
 Breast cancer intrinsic-like subtype (luminal B-like) luminal B breast carcinoma 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000214/ScoringFiles/PGS000214.txt.gz
PGS000215
(PRS330_HER2)
 PGP000088 |
Zhang H et al. Nat Genet (2020)
 Breast cancer intrinsic-like subtype (HER2-enriched-like) HER2 Positive Breast Carcinoma 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000215/ScoringFiles/PGS000215.txt.gz
PGS000216
(PRS330_TN)
 PGP000088 |
Zhang H et al. Nat Genet (2020)
 Breast cancer intrinsic-like subtype (triple negative) triple-negative breast cancer 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000216/ScoringFiles/PGS000216.txt.gz
PGS000217
(ADM)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Adrenomedullin (ADM) serum levels blood protein measurement 552,254
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000217/ScoringFiles/PGS000217.txt.gz
PGS000218
(AGRP)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Agouti-related protein (AGRP) serum levels blood protein measurement 552,121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000218/ScoringFiles/PGS000218.txt.gz
PGS000219
(CA-125)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Ovarian cancer-related tumor marker CA 125 (CA-125) serum levels blood protein measurement 553,819
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000219/ScoringFiles/PGS000219.txt.gz
PGS000220
(CCL20)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-C motif chemokine 20 (CCL20) serum levels blood protein measurement 551,989
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000220/ScoringFiles/PGS000220.txt.gz
PGS000221
(CCL3)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-C motif chemokine 3 (CCL3) serum levels blood protein measurement 552,347
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000221/ScoringFiles/PGS000221.txt.gz
PGS000222
(CCL4)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-C motif chemokine 4 (CCL4) serum levels blood protein measurement 552,214
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000222/ScoringFiles/PGS000222.txt.gz
PGS000223
(CD40)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor superfamily member 5 (CD40) serum levels blood protein measurement 552,187
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000223/ScoringFiles/PGS000223.txt.gz
PGS000224
(CHI3L1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Chitinase-3-like protein 1 (CHI3L1) serum levels blood protein measurement 552,106
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000224/ScoringFiles/PGS000224.txt.gz
PGS000225
(CSF-1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Macrophage colony-stimulating factor 1 (CSF-1) serum levels blood protein measurement 552,163
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000225/ScoringFiles/PGS000225.txt.gz
PGS000226
(CSTB)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Cystatin-B (CSTB) serum levels blood protein measurement 552,195
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000226/ScoringFiles/PGS000226.txt.gz
PGS000227
(CTSD)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Cathepsin D (CTSD) serum levels blood protein measurement 552,134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000227/ScoringFiles/PGS000227.txt.gz
PGS000228
(CTSL1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Cathepsin L1 (CTSL1) serum levels blood protein measurement 552,084
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000228/ScoringFiles/PGS000228.txt.gz
PGS000229
(CX3CL1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Fractalkine (CX3CL1) serum levels blood protein measurement 552,274
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000229/ScoringFiles/PGS000229.txt.gz
PGS000230
(CXCL1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 1 (CXCL1) serum levels blood protein measurement 552,234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000230/ScoringFiles/PGS000230.txt.gz
PGS000231
(CXCL16)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 16 (CXCL16) serum levels blood protein measurement 552,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000231/ScoringFiles/PGS000231.txt.gz
PGS000232
(CXCL6)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 6 (CXCL6) serum levels blood protein measurement 552,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000232/ScoringFiles/PGS000232.txt.gz
PGS000233
(Dkk-1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Dickkopf-related protein 1 (Dkk-1) serum levels blood protein measurement 552,067
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000233/ScoringFiles/PGS000233.txt.gz
PGS000234
(ECP)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Eosinophil cationic protein (ECP) serum levels blood protein measurement 553,046
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000234/ScoringFiles/PGS000234.txt.gz
PGS000235
(EGF)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Epidermal growth factor (EGF) serum levels blood protein measurement 553,163
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000235/ScoringFiles/PGS000235.txt.gz
PGS000236
(ESM-1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Endothelial cell-specific molecule 1 (ESM-1) serum levels blood protein measurement 553,240
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000236/ScoringFiles/PGS000236.txt.gz
PGS000237
(FABP4)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Fatty acid-binding protein, adipocyte (FABP4) serum levels blood protein measurement 552,343
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000237/ScoringFiles/PGS000237.txt.gz
PGS000238
(FAS)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Tumor necrosis factor receptor superfamily member 6 (FAS) serum levels blood protein measurement 552,335
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000238/ScoringFiles/PGS000238.txt.gz
PGS000239
(FGF-23)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Fibroblast growth factor 23 (FGF-23) serum levels blood protein measurement 552,100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000239/ScoringFiles/PGS000239.txt.gz
PGS000240
(FS)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Follistatin (FS) serum levels blood protein measurement 552,138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000240/ScoringFiles/PGS000240.txt.gz
PGS000241
(GAL)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Galanin peptides (GAL) serum levels blood protein measurement 553,548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000241/ScoringFiles/PGS000241.txt.gz
PGS000242
(Gal-3)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Galectin-3 (Gal-3) serum levels blood protein measurement 552,282
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000242/ScoringFiles/PGS000242.txt.gz
PGS000243
(GDF-15)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Growth/differentiation factor 15 (GDF-15) serum levels blood protein measurement 552,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000243/ScoringFiles/PGS000243.txt.gz
PGS000244
(GH)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Growth hormone (GH) serum levels blood protein measurement 552,236
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000244/ScoringFiles/PGS000244.txt.gz
PGS000245
(HB-EGF)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Proheparin-binding EGF-like growth factor (HB-EGF) serum levels blood protein measurement 552,108
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000245/ScoringFiles/PGS000245.txt.gz
PGS000246
(HGF)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Hepatocyte growth factor (HGF) serum levels blood protein measurement 552,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000246/ScoringFiles/PGS000246.txt.gz
PGS000247
(hK11)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Kallikrein-11 (hK11) serum levels blood protein measurement 553,239
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000247/ScoringFiles/PGS000247.txt.gz
PGS000248
(HSP_27)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Heat shock 27 kDa protein (HSP_27) serum levels blood protein measurement 552,212
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000248/ScoringFiles/PGS000248.txt.gz
PGS000249
(IL-18)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Interleukin-18 (IL-18) serum levels blood protein measurement 552,186
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000249/ScoringFiles/PGS000249.txt.gz
PGS000250
(IL-1ra)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Interleukin-1 receptor antagonist protein (IL-1ra) serum levels blood protein measurement 551,917
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000250/ScoringFiles/PGS000250.txt.gz
PGS000251
(IL-27)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Interleukin-27 (IL-27) serum levels blood protein measurement 552,026
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000251/ScoringFiles/PGS000251.txt.gz
Showing 201 to 250 of 4735 rows