Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0005093 |
Description | circumferential measurement of the largest part of the hip | Trait category |
Body measurement
|
Mapped terms |
2 mapped terms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS001162 (GBE_INI49) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Hip circumference | hip circumference | 24,605 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001162/ScoringFiles/PGS001162.txt.gz |
PGS001958 (portability-PLR_log_hip_circ) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Hip circumference | hip circumference | 103,123 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001958/ScoringFiles/PGS001958.txt.gz |
PGS002176 (portability-ldpred2_log_hip_circ) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Hip circumference | hip circumference | 977,411 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002176/ScoringFiles/PGS002176.txt.gz |
PGS003538 (cont-decay-log_hip_circ) |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Hip circumference | hip circumference | 979,739 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003538/ScoringFiles/PGS003538.txt.gz |
PGS003894 (INI49) |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Hip circumference | hip circumference | 32,756 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003894/ScoringFiles/PGS003894.txt.gz |
PGS004406 (X49.score) |
PGP000561 | Jung H et al. Commun Biol (2024) |
Hip circumference | hip circumference | 1,059,939 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004406/ScoringFiles/PGS004406.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM008532 | PGS001162 (GBE_INI49) |
PSS007361| African Ancestry| 6,416 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Hip circumference | — | — | R²: 0.07927 [0.06667, 0.09187] Incremental R2 (full-covars): 0.01779 PGS R2 (no covariates): 0.02214 [0.01507, 0.02921] |
age, sex, UKB array type, Genotype PCs | — |
PPM008533 | PGS001162 (GBE_INI49) |
PSS007362| East Asian Ancestry| 1,698 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Hip circumference | — | — | R²: 0.12482 [0.09552, 0.15412] Incremental R2 (full-covars): 0.03098 PGS R2 (no covariates): 0.04899 [0.02904, 0.06893] |
age, sex, UKB array type, Genotype PCs | — |
PPM008534 | PGS001162 (GBE_INI49) |
PSS007363| European Ancestry| 24,833 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Hip circumference | — | — | R²: 0.09925 [0.09221, 0.1063] Incremental R2 (full-covars): 0.09042 PGS R2 (no covariates): 0.09318 [0.0863, 0.10005] |
age, sex, UKB array type, Genotype PCs | — |
PPM008535 | PGS001162 (GBE_INI49) |
PSS007364| South Asian Ancestry| 7,755 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Hip circumference | — | — | R²: 0.09505 [0.08269, 0.1074] Incremental R2 (full-covars): 0.05495 PGS R2 (no covariates): 0.05341 [0.04373, 0.0631] |
age, sex, UKB array type, Genotype PCs | — |
PPM008536 | PGS001162 (GBE_INI49) |
PSS007365| European Ancestry| 67,319 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Hip circumference | — | — | R²: 0.09693 [0.09269, 0.10118] Incremental R2 (full-covars): 0.09505 PGS R2 (no covariates): 0.09536 [0.09115, 0.09958] |
age, sex, UKB array type, Genotype PCs | — |
PPM010539 | PGS001958 (portability-PLR_log_hip_circ) |
PSS009449| European Ancestry| 19,965 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3373 [0.3249, 0.3495] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010540 | PGS001958 (portability-PLR_log_hip_circ) |
PSS009223| European Ancestry| 4,125 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3442 [0.317, 0.3709] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010541 | PGS001958 (portability-PLR_log_hip_circ) |
PSS008777| European Ancestry| 6,637 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3192 [0.2974, 0.3407] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010542 | PGS001958 (portability-PLR_log_hip_circ) |
PSS008551| Greater Middle Eastern Ancestry| 1,181 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3169 [0.2642, 0.3677] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010543 | PGS001958 (portability-PLR_log_hip_circ) |
PSS008329| South Asian Ancestry| 6,267 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.284 [0.261, 0.3066] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010544 | PGS001958 (portability-PLR_log_hip_circ) |
PSS008106| East Asian Ancestry| 1,802 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.2472 [0.2031, 0.2903] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010545 | PGS001958 (portability-PLR_log_hip_circ) |
PSS007893| African Ancestry| 2,456 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.1739 [0.1351, 0.2121] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010546 | PGS001958 (portability-PLR_log_hip_circ) |
PSS008997| African Ancestry| 3,867 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.1434 [0.1123, 0.1742] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012255 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS009449| European Ancestry| 19,965 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3358 [0.3234, 0.3481] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012256 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS009223| European Ancestry| 4,125 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3499 [0.3228, 0.3765] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012257 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS008777| European Ancestry| 6,637 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3202 [0.2984, 0.3417] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012258 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS008551| Greater Middle Eastern Ancestry| 1,181 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.3271 [0.2747, 0.3775] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012259 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS008329| South Asian Ancestry| 6,267 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.2877 [0.2648, 0.3103] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012260 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS008106| East Asian Ancestry| 1,802 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.2616 [0.2178, 0.3043] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012261 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS007893| African Ancestry| 2,456 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.1822 [0.1435, 0.2203] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM012262 | PGS002176 (portability-ldpred2_log_hip_circ) |
PSS008997| African Ancestry| 3,867 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Hip circumference | — | — | Partial Correlation (partial-r): 0.1523 [0.1212, 0.183] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM017466 | PGS003538 (cont-decay-log_hip_circ) |
PSS010902| European Ancestry| 19,955 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.12 | sex, age, deprivation index, PC1-16 | — |
PPM017550 | PGS003538 (cont-decay-log_hip_circ) |
PSS010818| European Ancestry| 4,114 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.12 | sex, age, deprivation index, PC1-16 | — |
PPM017634 | PGS003538 (cont-decay-log_hip_circ) |
PSS010650| European Ancestry| 6,474 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.1 | sex, age, deprivation index, PC1-16 | — |
PPM017718 | PGS003538 (cont-decay-log_hip_circ) |
PSS010566| Greater Middle Eastern Ancestry| 1,152 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.11 | sex, age, deprivation index, PC1-16 | — |
PPM017802 | PGS003538 (cont-decay-log_hip_circ) |
PSS010230| European Ancestry| 2,344 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.11 | sex, age, deprivation index, PC1-16 | — |
PPM017886 | PGS003538 (cont-decay-log_hip_circ) |
PSS010482| South Asian Ancestry| 6,215 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.09 | sex, age, deprivation index, PC1-16 | — |
PPM017970 | PGS003538 (cont-decay-log_hip_circ) |
PSS010398| East Asian Ancestry| 1,790 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.05 | sex, age, deprivation index, PC1-16 | — |
PPM018054 | PGS003538 (cont-decay-log_hip_circ) |
PSS010314| African Ancestry| 2,443 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.04 | sex, age, deprivation index, PC1-16 | — |
PPM018138 | PGS003538 (cont-decay-log_hip_circ) |
PSS010734| African Ancestry| 3,838 individuals |
PGP000457 | Ding Y et al. bioRxiv (2022) |Pre |
Reported Trait: Hip circumference | — | — | partial-R2: 0.02 | sex, age, deprivation index, PC1-16 | — |
PPM018789 | PGS003894 (INI49) |
PSS011148| European Ancestry| 67,624 individuals |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Reported Trait: Hip circumference | — | — | R²: 0.10669 [0.1023, 0.11109] PGS R2 (no covariates): 0.10277 [0.09844, 0.1071] Incremental R2 (full-covars): 0.10175 |
age, sex, age^2, age*sex, Townsend deprivation index, genotype PCs (PC1-PC18) | — |
PPM018790 | PGS003894 (INI49) |
PSS011103| European Ancestry| 2,885 individuals |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Reported Trait: Hip circumference | — | — | R²: 0.10294 [0.08199, 0.12388] PGS R2 (no covariates): 0.1049 [0.0838, 0.126] Incremental R2 (full-covars): 0.102 |
age, sex, age^2, age*sex, Townsend deprivation index, genotype PCs (PC1-PC18) | — |
PPM018791 | PGS003894 (INI49) |
PSS011117| South Asian Ancestry| 1,473 individuals |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Reported Trait: Hip circumference | — | — | R²: 0.0983 [0.06963, 0.12697] Incremental R2 (full-covars): 0.07962 PGS R2 (no covariates): 0.08534 [0.05824, 0.11244] |
age, sex, age^2, age*sex, Townsend deprivation index, genotype PCs (PC1-PC18) | — |
PPM018792 | PGS003894 (INI49) |
PSS011160| African Ancestry| 1,195 individuals |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Reported Trait: Hip circumference | — | — | R²: 0.01885 [0.00373, 0.03396] PGS R2 (no covariates): 0.01479 [0.00134, 0.02824] Incremental R2 (full-covars): 0.01389 |
age, sex, age^2, age*sex, Townsend deprivation index, genotype PCs (PC1-PC18) | — |
PPM018793 | PGS003894 (INI49) |
PSS011174| Multi-ancestry (excluding European)| 7,971 individuals |
PGP000502 | Tanigawa Y et al. AJHG (2023) |
Reported Trait: Hip circumference | — | — | R²: 0.12987 [0.11614, 0.1436] PGS R2 (no covariates): 0.09021 [0.07824, 0.10217] Incremental R2 (full-covars): 0.07349 |
age, sex, age^2, age*sex, Townsend deprivation index, genotype PCs (PC1-PC18) | — |
PPM020521 | PGS004406 (X49.score) |
PSS011364| European Ancestry| 56,192 individuals |
PGP000561 | Jung H et al. Commun Biol (2024) |
Reported Trait: Hip circumference | — | — | PGS R2 (no covariates): 0.28017 | — | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS010398 | — | — | 1,790 individuals, 33.0 % Male samples |
Mean = 52.4 years Sd = 7.8 years |
East Asian | Chinese | UKB | — |
PSS007361 | — | — | 6,416 individuals | — | African unspecified | — | UKB | — |
PSS007362 | — | — | 1,698 individuals | — | East Asian | — | UKB | — |
PSS007363 | — | — | 24,833 individuals | — | European | non-white British ancestry | UKB | — |
PSS007364 | — | — | 7,755 individuals | — | South Asian | — | UKB | — |
PSS007365 | — | — | 67,319 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS008777 | — | — | 6,637 individuals | — | European | Italy (South Europe) | UKB | — |
PSS011148 | — | — | 67,624 individuals | — | European (white British ancestry) |
— | UKB | — |
PSS007893 | — | — | 2,456 individuals | — | African American or Afro-Caribbean | Carribean | UKB | — |
PSS011160 | — | — | 1,195 individuals | — | African unspecified | — | UKB | — |
PSS011174 | — | — | 7,971 individuals | — | East Asian, Other admixed ancestry | East Asian, Other admixed ancestry | UKB | — |
PSS008551 | — | — | 1,181 individuals | — | Greater Middle Eastern (Middle Eastern, North African or Persian) | Iran (Middle East) | UKB | — |
PSS010818 | — | — | 4,114 individuals, 38.0 % Male samples |
Mean = 54.3 years Sd = 7.5 years |
European | Polish | UKB | — |
PSS009449 | — | — | 19,965 individuals | — | European | UK (+ Ireland) | UKB | — |
PSS010566 | — | — | 1,152 individuals, 60.0 % Male samples |
Mean = 52.0 years Sd = 8.0 years |
Greater Middle Eastern (Middle Eastern, North African or Persian) | Iranian | UKB | — |
PSS010314 | — | — | 2,443 individuals, 36.0 % Male samples |
Mean = 52.5 years Sd = 8.1 years |
African American or Afro-Caribbean | Caribbean | UKB | — |
PSS009223 | — | — | 4,125 individuals | — | European | Poland (NE Europe) | UKB | — |
PSS008329 | — | — | 6,267 individuals | — | South Asian | India (South Asia) | UKB | — |
PSS010734 | — | — | 3,838 individuals, 46.0 % Male samples |
Mean = 51.9 years Sd = 8.1 years |
African unspecified | Nigerian | UKB | — |
PSS010482 | — | — | 6,215 individuals, 54.0 % Male samples |
Mean = 53.3 years Sd = 8.4 years |
South Asian | Indian | UKB | — |
PSS010230 | — | — | 2,344 individuals, 45.0 % Male samples |
Mean = 58.1 years Sd = 7.1 years |
European | Ashkenazi | UKB | — |
PSS011103 | — | — | 2,885 individuals | — | European (non-white British ancestry) |
— | UKB | — |
PSS011364 | — | — | 56,192 individuals | — | European | — | UKB | — |
PSS008997 | — | — | 3,867 individuals | — | African unspecified | Nigeria (West Africa) | UKB | — |
PSS008106 | — | — | 1,802 individuals | — | East Asian | China (East Asia) | UKB | — |
PSS011117 | — | — | 1,473 individuals | — | South Asian | — | UKB | — |
PSS010902 | — | — | 19,955 individuals, 46.0 % Male samples |
Mean = 56.9 years Sd = 7.9 years |
European | white British | UKB | — |
PSS010650 | — | — | 6,474 individuals, 45.0 % Male samples |
Mean = 54.5 years Sd = 8.4 years |
European | Italian | UKB | — |