Trait: balding measurement

Experimental Factor Ontology (EFO) Information
Identifier EFO_0007825
Description quantification of the amount of balding in an individual
Trait category
Other measurement
Mapped term PMID:26926045

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
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Polygenic Score ID & Name
PGS Publication ID (PGP)
Reported Trait
Mapped Trait(s) (Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS001987
(portability-PLR_M_less_hair)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Hair/balding patternbalding measurement23,692
-
D
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001987/ScoringFiles/PGS001987.txt.gz
PGS002204
(portability-ldpred2_M_less_hair)
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Hair/balding patternbalding measurement593,179
-
D
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002204/ScoringFiles/PGS002204.txt.gz
PGS002314
(body_BALDING1.BOLT-LMM)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement1,109,311
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002314/ScoringFiles/PGS002314.txt.gz
PGS002386
(body_BALDING1.P+T.0.0001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement7,823
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002386/ScoringFiles/PGS002386.txt.gz
PGS002435
(body_BALDING1.P+T.0.001)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement21,564
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002435/ScoringFiles/PGS002435.txt.gz
PGS002484
(body_BALDING1.P+T.0.01)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement106,858
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002484/ScoringFiles/PGS002484.txt.gz
PGS002533
(body_BALDING1.P+T.1e-06)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement2,899
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002533/ScoringFiles/PGS002533.txt.gz
PGS002582
(body_BALDING1.P+T.5e-08)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement1,998
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002582/ScoringFiles/PGS002582.txt.gz
PGS002631
(body_BALDING1.PolyFun-pred)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement877,406
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002631/ScoringFiles/PGS002631.txt.gz
PGS002680
(body_BALDING1.SBayesR)
PGP000332 |
Weissbrod O et al. Nat Genet (2022)
Balding Type 1balding measurement965,079
G
-
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002680/ScoringFiles/PGS002680.txt.gz
PGS003558
(cont-decay-M_less_hair)
PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		Hair/balding patternbalding measurement979,739
-
D
E
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003558/ScoringFiles/PGS003558.txt.gz
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Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

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PGS Performance
Metric ID (PPM)
Evaluated Score
PGS Sample Set ID
(PSS)
Performance Source
Trait
PGS Effect Sizes
(per SD change)
Classification Metrics
Other Metrics
Covariates Included in the Model
PGS Performance:
Other Relevant Information
PPM010771PGS001987
(portability-PLR_M_less_hair)
PSS009379|
European Ancestry|
4,285 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4662 [0.4424, 0.4894]sex, age, birth date, deprivation index, 16 PCs—
PPM010772PGS001987
(portability-PLR_M_less_hair)
PSS009153|
European Ancestry|
707 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4184 [0.3547, 0.4782]sex, age, birth date, deprivation index, 16 PCs—
PPM010773PGS001987
(portability-PLR_M_less_hair)
PSS008707|
European Ancestry|
1,357 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4335 [0.3889, 0.476]sex, age, birth date, deprivation index, 16 PCs—
PPM010774PGS001987
(portability-PLR_M_less_hair)
PSS008481|
Greater Middle Eastern Ancestry|
297 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4018 [0.2983, 0.496]sex, age, birth date, deprivation index, 16 PCs—
PPM010775PGS001987
(portability-PLR_M_less_hair)
PSS008259|
South Asian Ancestry|
1,484 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.3074 [0.2602, 0.353]sex, age, birth date, deprivation index, 16 PCs—
PPM010776PGS001987
(portability-PLR_M_less_hair)
PSS008037|
East Asian Ancestry|
261 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.1958 [0.0715, 0.3142]sex, age, birth date, deprivation index, 16 PCs—
PPM010777PGS001987
(portability-PLR_M_less_hair)
PSS007823|
African Ancestry|
375 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.2977 [0.1998, 0.3897]sex, age, birth date, deprivation index, 16 PCs—
PPM010778PGS001987
(portability-PLR_M_less_hair)
PSS008927|
African Ancestry|
760 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.1792 [0.1086, 0.248]sex, age, birth date, deprivation index, 16 PCs—
PPM012479PGS002204
(portability-ldpred2_M_less_hair)
PSS009379|
European Ancestry|
4,285 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4597 [0.4357, 0.483]sex, age, birth date, deprivation index, 16 PCs—
PPM012480PGS002204
(portability-ldpred2_M_less_hair)
PSS009153|
European Ancestry|
707 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.3947 [0.3296, 0.4559]sex, age, birth date, deprivation index, 16 PCs—
PPM012481PGS002204
(portability-ldpred2_M_less_hair)
PSS008707|
European Ancestry|
1,357 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.4151 [0.3697, 0.4585]sex, age, birth date, deprivation index, 16 PCs—
PPM012482PGS002204
(portability-ldpred2_M_less_hair)
PSS008481|
Greater Middle Eastern Ancestry|
297 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.376 [0.2703, 0.4727]sex, age, birth date, deprivation index, 16 PCs—
PPM012483PGS002204
(portability-ldpred2_M_less_hair)
PSS008259|
South Asian Ancestry|
1,484 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.3043 [0.257, 0.35]sex, age, birth date, deprivation index, 16 PCs—
PPM012484PGS002204
(portability-ldpred2_M_less_hair)
PSS008037|
East Asian Ancestry|
261 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.1848 [0.0601, 0.3039]sex, age, birth date, deprivation index, 16 PCs—
PPM012485PGS002204
(portability-ldpred2_M_less_hair)
PSS007823|
African Ancestry|
375 individuals
PGP000263 |
Privé F et al. Am J Hum Genet (2022)
Reported Trait: Hair/balding pattern——Partial Correlation (partial-r): 0.2965 [0.1985, 0.3886]sex, age, birth date, deprivation index, 16 PCs—
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Evaluated Samples

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PGS Sample Set ID
(PSS)
Phenotype Definitions and Methods
Participant Follow-up Time
Sample Numbers
Age of Study Participants
Sample Ancestry
Additional Ancestry Description
Cohort(s)
Additional Sample/Cohort Information
PSS007823——375 individuals—African American or Afro-CaribbeanCarribeanUKB—
PSS008037——261 individuals—East AsianChina (East Asia)UKB—
PSS008259——1,484 individuals—South AsianIndia (South Asia)UKB—
PSS008481——297 individuals—Greater Middle Eastern (Middle Eastern, North African or Persian)Iran (Middle East)UKB—
PSS008707——1,357 individuals—EuropeanItaly (South Europe)UKB—
PSS008927——760 individuals—African unspecifiedNigeria (West Africa)UKB—
PSS009153——707 individuals—EuropeanPoland (NE Europe)UKB—
PSS009379——4,285 individuals—EuropeanUK (+ Ireland)UKB—
PSS009699——2,687 individuals—African unspecified—UKB—
PSS009700——331 individuals—East Asian—UKB—
PSS009701——18,771 individuals—EuropeanNon-British EuropeanUKB—
PSS009702——4,185 individuals—South Asian—UKB—
PSS010252——1,045 individuals,
100.0 % Male samples
Mean = 58.4 years
Sd = 7.1 years		EuropeanAshkenaziUKB—
PSS010336——838 individuals,
100.0 % Male samples
Mean = 52.8 years
Sd = 8.4 years		African American or Afro-CaribbeanCaribbeanUKB—
PSS010420——574 individuals,
100.0 % Male samples
Mean = 52.3 years
Sd = 8.2 years		East AsianChineseUKB—
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