| Experimental Factor Ontology (EFO) Information | |
| Identifier | EFO_0007937 |
| Description | quantification of the levels of some protein in a blood sample | Trait category |
Other measurement
|
| Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
|---|---|---|---|---|---|---|
| PGS000217 (ADM) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Adrenomedullin (ADM) serum levels | blood protein measurement | 552,254 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000217/ScoringFiles/PGS000217.txt.gz |
| PGS000218 (AGRP) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Agouti-related protein (AGRP) serum levels | blood protein measurement | 552,121 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000218/ScoringFiles/PGS000218.txt.gz |
| PGS000219 (CA-125) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Ovarian cancer-related tumor marker CA 125 (CA-125) serum levels | blood protein measurement | 553,819 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000219/ScoringFiles/PGS000219.txt.gz |
| PGS000220 (CCL20) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-C motif chemokine 20 (CCL20) serum levels | blood protein measurement | 551,989 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000220/ScoringFiles/PGS000220.txt.gz |
| PGS000221 (CCL3) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-C motif chemokine 3 (CCL3) serum levels | blood protein measurement | 552,347 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000221/ScoringFiles/PGS000221.txt.gz |
| PGS000222 (CCL4) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-C motif chemokine 4 (CCL4) serum levels | blood protein measurement | 552,214 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000222/ScoringFiles/PGS000222.txt.gz |
| PGS000223 (CD40) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tumor necrosis factor receptor superfamily member 5 (CD40) serum levels | blood protein measurement | 552,187 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000223/ScoringFiles/PGS000223.txt.gz |
| PGS000224 (CHI3L1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Chitinase-3-like protein 1 (CHI3L1) serum levels | blood protein measurement | 552,106 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000224/ScoringFiles/PGS000224.txt.gz |
| PGS000225 (CSF-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Macrophage colony-stimulating factor 1 (CSF-1) serum levels | blood protein measurement | 552,163 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000225/ScoringFiles/PGS000225.txt.gz |
| PGS000226 (CSTB) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Cystatin-B (CSTB) serum levels | blood protein measurement | 552,195 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000226/ScoringFiles/PGS000226.txt.gz |
| PGS000227 (CTSD) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Cathepsin D (CTSD) serum levels | blood protein measurement | 552,134 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000227/ScoringFiles/PGS000227.txt.gz |
| PGS000228 (CTSL1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Cathepsin L1 (CTSL1) serum levels | blood protein measurement | 552,084 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000228/ScoringFiles/PGS000228.txt.gz |
| PGS000229 (CX3CL1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Fractalkine (CX3CL1) serum levels | blood protein measurement | 552,274 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000229/ScoringFiles/PGS000229.txt.gz |
| PGS000230 (CXCL1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-X-C motif chemokine 1 (CXCL1) serum levels | blood protein measurement | 552,234 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000230/ScoringFiles/PGS000230.txt.gz |
| PGS000231 (CXCL16) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-X-C motif chemokine 16 (CXCL16) serum levels | blood protein measurement | 552,241 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000231/ScoringFiles/PGS000231.txt.gz |
| PGS000232 (CXCL6) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
C-X-C motif chemokine 6 (CXCL6) serum levels | blood protein measurement | 552,061 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000232/ScoringFiles/PGS000232.txt.gz |
| PGS000233 (Dkk-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Dickkopf-related protein 1 (Dkk-1) serum levels | blood protein measurement | 552,067 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000233/ScoringFiles/PGS000233.txt.gz |
| PGS000234 (ECP) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Eosinophil cationic protein (ECP) serum levels | blood protein measurement | 553,046 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000234/ScoringFiles/PGS000234.txt.gz |
| PGS000235 (EGF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Epidermal growth factor (EGF) serum levels | blood protein measurement | 553,163 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000235/ScoringFiles/PGS000235.txt.gz |
| PGS000236 (ESM-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Endothelial cell-specific molecule 1 (ESM-1) serum levels | blood protein measurement | 553,240 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000236/ScoringFiles/PGS000236.txt.gz |
| PGS000237 (FABP4) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Fatty acid-binding protein, adipocyte (FABP4) serum levels | blood protein measurement | 552,343 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000237/ScoringFiles/PGS000237.txt.gz |
| PGS000238 (FAS) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tumor necrosis factor receptor superfamily member 6 (FAS) serum levels | blood protein measurement | 552,335 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000238/ScoringFiles/PGS000238.txt.gz |
| PGS000239 (FGF-23) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Fibroblast growth factor 23 (FGF-23) serum levels | blood protein measurement | 552,100 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000239/ScoringFiles/PGS000239.txt.gz |
| PGS000240 (FS) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Follistatin (FS) serum levels | blood protein measurement | 552,138 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000240/ScoringFiles/PGS000240.txt.gz |
| PGS000241 (GAL) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Galanin peptides (GAL) serum levels | blood protein measurement | 553,548 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000241/ScoringFiles/PGS000241.txt.gz |
| PGS000242 (Gal-3) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Galectin-3 (Gal-3) serum levels | blood protein measurement | 552,282 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000242/ScoringFiles/PGS000242.txt.gz |
| PGS000243 (GDF-15) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Growth/differentiation factor 15 (GDF-15) serum levels | blood protein measurement | 552,228 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000243/ScoringFiles/PGS000243.txt.gz |
| PGS000244 (GH) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Growth hormone (GH) serum levels | blood protein measurement | 552,236 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000244/ScoringFiles/PGS000244.txt.gz |
| PGS000245 (HB-EGF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Proheparin-binding EGF-like growth factor (HB-EGF) serum levels | blood protein measurement | 552,108 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000245/ScoringFiles/PGS000245.txt.gz |
| PGS000246 (HGF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Hepatocyte growth factor (HGF) serum levels | blood protein measurement | 552,104 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000246/ScoringFiles/PGS000246.txt.gz |
| PGS000247 (hK11) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Kallikrein-11 (hK11) serum levels | blood protein measurement | 553,239 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000247/ScoringFiles/PGS000247.txt.gz |
| PGS000248 (HSP_27) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Heat shock 27 kDa protein (HSP_27) serum levels | blood protein measurement | 552,212 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000248/ScoringFiles/PGS000248.txt.gz |
| PGS000249 (IL-18) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-18 (IL-18) serum levels | blood protein measurement | 552,186 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000249/ScoringFiles/PGS000249.txt.gz |
| PGS000250 (IL-1ra) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-1 receptor antagonist protein (IL-1ra) serum levels | blood protein measurement | 551,917 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000250/ScoringFiles/PGS000250.txt.gz |
| PGS000251 (IL-27) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-27 (IL-27) serum levels | blood protein measurement | 552,026 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000251/ScoringFiles/PGS000251.txt.gz |
| PGS000252 (IL-6) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-6 (IL-6) serum levels | blood protein measurement | 552,426 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000252/ScoringFiles/PGS000252.txt.gz |
| PGS000253 (IL-6RA) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-6 receptor subunit alpha (IL-6RA) serum levels | blood protein measurement | 552,132 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000253/ScoringFiles/PGS000253.txt.gz |
| PGS000254 (IL-8) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Interleukin-8 (IL-8) serum levels | blood protein measurement | 551,990 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000254/ScoringFiles/PGS000254.txt.gz |
| PGS000255 (IL16) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Pro-interleukin-16 (IL16) serum levels | blood protein measurement | 551,884 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000255/ScoringFiles/PGS000255.txt.gz |
| PGS000256 (ITGB1BP2) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Melusin (ITGB1BP2) serum levels | blood protein measurement | 552,423 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000256/ScoringFiles/PGS000256.txt.gz |
| PGS000257 (KIM-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Kidney injury molecule 1 (KIM-1) serum levels | blood protein measurement | 552,062 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000257/ScoringFiles/PGS000257.txt.gz |
| PGS000258 (KLK6) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Kallikrein-6 (KLK6) serum levels | blood protein measurement | 552,053 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000258/ScoringFiles/PGS000258.txt.gz |
| PGS000259 (LEP) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Leptin (LEP) serum levels | blood protein measurement | 552,110 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000259/ScoringFiles/PGS000259.txt.gz |
| PGS000260 (LOX-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Lectin-like oxidized LDL receptor 1 (LOX-1) serum levels | blood protein measurement | 552,045 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000260/ScoringFiles/PGS000260.txt.gz |
| PGS000261 (mAmP) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Membrane-bound aminopeptidase P (mAmP) serum levels | blood protein measurement | 553,070 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000261/ScoringFiles/PGS000261.txt.gz |
| PGS000262 (MB) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Myoglobin (MB) serum levels | blood protein measurement | 552,171 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000262/ScoringFiles/PGS000262.txt.gz |
| PGS000263 (MCP-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Monocyte chemotactic protein 1 (MCP-1) serum levels | blood protein measurement | 552,000 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000263/ScoringFiles/PGS000263.txt.gz |
| PGS000264 (MMP-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Matrix metalloproteinase-1 (MMP-1) serum levels | blood protein measurement | 552,116 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000264/ScoringFiles/PGS000264.txt.gz |
| PGS000265 (MMP-10) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Matrix metalloproteinase-10 (MMP-10) serum levels | blood protein measurement | 552,072 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000265/ScoringFiles/PGS000265.txt.gz |
| PGS000266 (MMP-12) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Matrix metalloproteinase-12 (MMP-12) serum levels | blood protein measurement | 552,021 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000266/ScoringFiles/PGS000266.txt.gz |
| PGS000267 (MMP-3) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Matrix metalloproteinase-3 (MMP-3) serum levels | blood protein measurement | 552,328 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000267/ScoringFiles/PGS000267.txt.gz |
| PGS000268 (MMP-7) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Matrix metalloproteinase-7 (MMP-7) serum levels | blood protein measurement | 552,052 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000268/ScoringFiles/PGS000268.txt.gz |
| PGS000269 (MPO) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Myeloperoxidase (MPO) serum levels | blood protein measurement | 552,278 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000269/ScoringFiles/PGS000269.txt.gz |
| PGS000270 (NT-pro_BNP) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
N-terminal prohormone brain natriuretic peptide (NT-pro_BNP) serum levels | blood protein measurement | 554,137 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000270/ScoringFiles/PGS000270.txt.gz |
| PGS000271 (OPG) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Osteoprotegerin (OPG) serum levels | blood protein measurement | 552,205 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000271/ScoringFiles/PGS000271.txt.gz |
| PGS000272 (PAPPA) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Pappalysin-1 (PAPPA) serum levels | blood protein measurement | 552,298 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000272/ScoringFiles/PGS000272.txt.gz |
| PGS000273 (PAR-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Proteinase-activated receptor 1 (PAR-1) serum levels | blood protein measurement | 552,202 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000273/ScoringFiles/PGS000273.txt.gz |
| PGS000274 (PDGF_subunit_B) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Platelet-derived growth factor subunit B (PDGF_subunit_B) serum levels | blood protein measurement | 552,265 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000274/ScoringFiles/PGS000274.txt.gz |
| PGS000275 (PECAM-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Platelet endothelial cell adhesion molecule (PECAM-1) serum levels | blood protein measurement | 552,010 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000275/ScoringFiles/PGS000275.txt.gz |
| PGS000276 (PlGF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Placenta growth factor (PlGF) serum levels | blood protein measurement | 552,275 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000276/ScoringFiles/PGS000276.txt.gz |
| PGS000277 (PSGL-1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
P-selectin glycoprotein ligand 1 (PSGL-1) serum levels | blood protein measurement | 552,165 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000277/ScoringFiles/PGS000277.txt.gz |
| PGS000278 (PTX3) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Pentraxin-related protein PTX3 (PTX3) serum levels | blood protein measurement | 552,474 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000278/ScoringFiles/PGS000278.txt.gz |
| PGS000279 (RAGE) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Receptor for advanced glycosylation end products (RAGE) serum levels | blood protein measurement | 552,298 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000279/ScoringFiles/PGS000279.txt.gz |
| PGS000280 (REN) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Renin (REN) serum levels | blood protein measurement | 552,078 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000280/ScoringFiles/PGS000280.txt.gz |
| PGS000281 (RETN) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Resistin (RETN) serum levels | blood protein measurement | 552,002 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000281/ScoringFiles/PGS000281.txt.gz |
| PGS000282 (SCF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Stem cell factor (SCF) serum levels | blood protein measurement | 552,420 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000282/ScoringFiles/PGS000282.txt.gz |
| PGS000283 (SPON1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Spondin-1 (SPON1) serum levels | blood protein measurement | 552,703 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000283/ScoringFiles/PGS000283.txt.gz |
| PGS000284 (ST2) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
ST2 protein (ST2) serum levels | blood protein measurement | 552,006 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000284/ScoringFiles/PGS000284.txt.gz |
| PGS000285 (TF) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tissue factor (TF) serum levels | blood protein measurement | 552,228 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000285/ScoringFiles/PGS000285.txt.gz |
| PGS000286 (TM) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Thrombomodulin (TM) serum levels | blood protein measurement | 552,241 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000286/ScoringFiles/PGS000286.txt.gz |
| PGS000287 (TNF-R1) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tumor necrosis factor receptor 1 (TNF-R1) serum levels | blood protein measurement | 552,317 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000287/ScoringFiles/PGS000287.txt.gz |
| PGS000288 (TNF-R2) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tumor necrosis factor receptor 2 (TNF-R2) serum levels | blood protein measurement | 552,185 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000288/ScoringFiles/PGS000288.txt.gz |
| PGS000289 (TNFSF14) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Tumor necrosis factor ligand superfamily member 14 (TNFSF14) serum levels | blood protein measurement | 552,048 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000289/ScoringFiles/PGS000289.txt.gz |
| PGS000290 (TRAIL) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
TNF-related apoptosis-inducing ligand (TRAIL) serum levels | blood protein measurement | 552,279 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000290/ScoringFiles/PGS000290.txt.gz |
| PGS000291 (TRAIL-R2) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
TNF-related apoptosis-inducing ligand receptor 2 (TRAIL-R2) serum levels | blood protein measurement | 552,198 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000291/ScoringFiles/PGS000291.txt.gz |
| PGS000292 (TRANCE) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
TNF-related activation-induced cytokine (TRANCE) serum levels | blood protein measurement | 552,090 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000292/ScoringFiles/PGS000292.txt.gz |
| PGS000293 (U-PAR) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Urokinase plasminogen activator surface receptor (U-PAR) serum levels | blood protein measurement | 552,048 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000293/ScoringFiles/PGS000293.txt.gz |
| PGS000294 (VEGF-A) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Vascular endothelial growth factor A (VEGF-A) serum levels | blood protein measurement | 552,070 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000294/ScoringFiles/PGS000294.txt.gz |
| PGS000295 (VEGF-D) |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Vascular endothelial growth factor D (VEGF-D) serum levels | blood protein measurement | 551,905 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000295/ScoringFiles/PGS000295.txt.gz |
| PGS001081 (GBE_INI23027) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
JC VP1 antigen for Human Polyomavirus JCV | blood protein measurement | 9 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001081/ScoringFiles/PGS001081.txt.gz |
| PGS001082 (GBE_INI23028) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
MC VP1 antigen for Merkel Cell Polyomavirus | blood protein measurement | 143 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001082/ScoringFiles/PGS001082.txt.gz |
| PGS001407 (GBE_INI23022) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | blood protein measurement | 66 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001407/ScoringFiles/PGS001407.txt.gz |
|
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
|---|---|---|---|---|---|---|---|---|---|
| PPM000689 | PGS000217 (ADM) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Adrenomedullin (ADM) serum levels | — | — | R²: 0.07313 R² difference (PGS+covariates vs. covariates only): 0.01413 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000674 | PGS000218 (AGRP) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Agouti-related protein (AGRP) serum levels | — | — | R²: 0.0215 R² difference (PGS+covariates vs. covariates only): 0.0075 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000687 | PGS000219 (CA-125) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Ovarian cancer-related tumor marker CA 125 (CA-125) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.01315 R²: 0.02315 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000685 | PGS000220 (CCL20) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-C motif chemokine 20 (CCL20) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.01158 R²: 0.02158 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000726 | PGS000221 (CCL3) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-C motif chemokine 3 (CCL3) serum levels | — | — | R²: 0.10469 R² difference (PGS+covariates vs. covariates only): 0.05869 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000736 | PGS000222 (CCL4) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-C motif chemokine 4 (CCL4) serum levels | — | — | R²: 0.13833 R² difference (PGS+covariates vs. covariates only): 0.11033 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000717 | PGS000223 (CD40) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tumor necrosis factor receptor superfamily member 5 (CD40) serum levels | — | — | R²: 0.04728 R² difference (PGS+covariates vs. covariates only): 0.04528 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000729 | PGS000224 (CHI3L1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Chitinase-3-like protein 1 (CHI3L1) serum levels | — | — | R²: 0.15424 R² difference (PGS+covariates vs. covariates only): 0.07924 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000669 | PGS000225 (CSF-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Macrophage colony-stimulating factor 1 (CSF-1) serum levels | — | — | R²: 0.01849 R² difference (PGS+covariates vs. covariates only): 0.00549 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000734 | PGS000226 (CSTB) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Cystatin-B (CSTB) serum levels | — | — | R²: 0.14472 R² difference (PGS+covariates vs. covariates only): 0.10072 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000695 | PGS000227 (CTSD) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Cathepsin D (CTSD) serum levels | — | — | R²: 0.09886 R² difference (PGS+covariates vs. covariates only): 0.01786 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000712 | PGS000228 (CTSL1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Cathepsin L1 (CTSL1) serum levels | — | — | R²: 0.09752 R² difference (PGS+covariates vs. covariates only): 0.03852 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000703 | PGS000229 (CX3CL1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Fractalkine (CX3CL1) serum levels | — | — | R²: 0.03603 R² difference (PGS+covariates vs. covariates only): 0.02403 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000730 | PGS000230 (CXCL1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-X-C motif chemokine 1 (CXCL1) serum levels | — | — | R²: 0.08781 R² difference (PGS+covariates vs. covariates only): 0.07981 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000691 | PGS000231 (CXCL16) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-X-C motif chemokine 16 (CXCL16) serum levels | — | — | R²: 0.01734 R² difference (PGS+covariates vs. covariates only): 0.01434 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000740 | PGS000232 (CXCL6) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: C-X-C motif chemokine 6 (CXCL6) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.1496 R²: 0.1536 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000698 | PGS000233 (Dkk-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Dickkopf-related protein 1 (Dkk-1) serum levels | — | — | R²: 0.02226 R² difference (PGS+covariates vs. covariates only): 0.01926 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000697 | PGS000234 (ECP) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Eosinophil cationic protein (ECP) serum levels | — | — | R²: 0.023 R² difference (PGS+covariates vs. covariates only): 0.019 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000680 | PGS000235 (EGF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Epidermal growth factor (EGF) serum levels | — | — | R²: 0.01262 R² difference (PGS+covariates vs. covariates only): 0.00962 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000679 | PGS000236 (ESM-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Endothelial cell-specific molecule 1 (ESM-1) serum levels | — | — | R²: 0.03924 R² difference (PGS+covariates vs. covariates only): 0.00924 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000677 | PGS000237 (FABP4) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Fatty acid-binding protein, adipocyte (FABP4) serum levels | — | — | R²: 0.14804 R² difference (PGS+covariates vs. covariates only): 0.00804 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000704 | PGS000238 (FAS) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tumor necrosis factor receptor superfamily member 6 (FAS) serum levels | — | — | R²: 0.08826 R² difference (PGS+covariates vs. covariates only): 0.02626 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000692 | PGS000239 (FGF-23) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Fibroblast growth factor 23 (FGF-23) serum levels | — | — | R²: 0.01903 R² difference (PGS+covariates vs. covariates only): 0.01503 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000684 | PGS000240 (FS) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Follistatin (FS) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.01152 R²: 0.05152 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000707 | PGS000241 (GAL) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Galanin peptides (GAL) serum levels | — | — | R²: 0.07696 R² difference (PGS+covariates vs. covariates only): 0.02796 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000721 | PGS000242 (Gal-3) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Galectin-3 (Gal-3) serum levels | — | — | R²: 0.11502 R² difference (PGS+covariates vs. covariates only): 0.05002 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000718 | PGS000243 (GDF-15) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Growth/differentiation factor 15 (GDF-15) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.04577 R²: 0.19577 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000665 | PGS000244 (GH) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Growth hormone (GH) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.00246 R²: 0.32546 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000670 | PGS000245 (HB-EGF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Proheparin-binding EGF-like growth factor (HB-EGF) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.00607 R²: 0.00807 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000686 | PGS000246 (HGF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Hepatocyte growth factor (HGF) serum levels | — | — | R²: 0.0741 R² difference (PGS+covariates vs. covariates only): 0.0131 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000693 | PGS000247 (hK11) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Kallikrein-11 (hK11) serum levels | — | — | R²: 0.03621 R² difference (PGS+covariates vs. covariates only): 0.01721 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000735 | PGS000248 (HSP_27) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Heat shock 27 kDa protein (HSP_27) serum levels | — | — | R²: 0.10996 R² difference (PGS+covariates vs. covariates only): 0.10196 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000711 | PGS000249 (IL-18) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-18 (IL-18) serum levels | — | — | R²: 0.08863 R² difference (PGS+covariates vs. covariates only): 0.03763 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000714 | PGS000250 (IL-1ra) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-1 receptor antagonist protein (IL-1ra) serum levels | — | — | R²: 0.05359 R² difference (PGS+covariates vs. covariates only): 0.03959 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000733 | PGS000251 (IL-27) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-27 (IL-27) serum levels | — | — | R²: 0.11711 R² difference (PGS+covariates vs. covariates only): 0.09911 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000675 | PGS000252 (IL-6) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-6 (IL-6) serum levels | — | — | R²: 0.01995 R² difference (PGS+covariates vs. covariates only): 0.00795 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000742 | PGS000253 (IL-6RA) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-6 receptor subunit alpha (IL-6RA) serum levels | — | — | R²: 0.31718 R² difference (PGS+covariates vs. covariates only): 0.28118 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000666 | PGS000254 (IL-8) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Interleukin-8 (IL-8) serum levels | — | — | R²: 0.03298 R² difference (PGS+covariates vs. covariates only): 0.00298 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000737 | PGS000255 (IL16) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Pro-interleukin-16 (IL16) serum levels | — | — | R²: 0.1446 R² difference (PGS+covariates vs. covariates only): 0.1136 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000667 | PGS000256 (ITGB1BP2) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Melusin (ITGB1BP2) serum levels | — | — | R²: 0.00624 R² difference (PGS+covariates vs. covariates only): 0.00324 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000739 | PGS000257 (KIM-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Kidney injury molecule 1 (KIM-1) serum levels | — | — | R²: 0.22579 R² difference (PGS+covariates vs. covariates only): 0.13579 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000696 | PGS000258 (KLK6) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Kallikrein-6 (KLK6) serum levels | — | — | R²: 0.03607 R² difference (PGS+covariates vs. covariates only): 0.01807 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000672 | PGS000259 (LEP) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Leptin (LEP) serum levels | — | — | R²: 0.32983 R² difference (PGS+covariates vs. covariates only): 0.00683 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000681 | PGS000260 (LOX-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Lectin-like oxidized LDL receptor 1 (LOX-1) serum levels | — | — | R²: 0.01745 R² difference (PGS+covariates vs. covariates only): 0.01045 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000694 | PGS000261 (mAmP) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Membrane-bound aminopeptidase P (mAmP) serum levels | — | — | R²: 0.02085 R² difference (PGS+covariates vs. covariates only): 0.01785 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000683 | PGS000262 (MB) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Myoglobin (MB) serum levels | — | — | R²: 0.14211 R² difference (PGS+covariates vs. covariates only): 0.01111 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000702 | PGS000263 (MCP-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Monocyte chemotactic protein 1 (MCP-1) serum levels | — | — | R²: 0.04833 R² difference (PGS+covariates vs. covariates only): 0.02333 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000738 | PGS000264 (MMP-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Matrix metalloproteinase-1 (MMP-1) serum levels | — | — | R²: 0.2112 R² difference (PGS+covariates vs. covariates only): 0.1192 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000722 | PGS000265 (MMP-10) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Matrix metalloproteinase-10 (MMP-10) serum levels | — | — | R²: 0.0618 R² difference (PGS+covariates vs. covariates only): 0.0518 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000731 | PGS000266 (MMP-12) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Matrix metalloproteinase-12 (MMP-12) serum levels | — | — | R²: 0.08867 R² difference (PGS+covariates vs. covariates only): 0.08867 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000728 | PGS000267 (MMP-3) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Matrix metalloproteinase-3 (MMP-3) serum levels | — | — | R²: 0.40253 R² difference (PGS+covariates vs. covariates only): 0.06753 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000701 | PGS000268 (MMP-7) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Matrix metalloproteinase-7 (MMP-7) serum levels | — | — | R²: 0.0571 R² difference (PGS+covariates vs. covariates only): 0.0221 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000719 | PGS000269 (MPO) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Myeloperoxidase (MPO) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.04865 R²: 0.05565 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000664 | PGS000270 (NT-pro_BNP) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: N-terminal prohormone brain natriuretic peptide (NT-pro_BNP) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.00108 R²: 0.07108 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000699 | PGS000271 (OPG) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Osteoprotegerin (OPG) serum levels | — | — | R²: 0.09428 R² difference (PGS+covariates vs. covariates only): 0.02128 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000720 | PGS000272 (PAPPA) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Pappalysin-1 (PAPPA) serum levels | — | — | R²: 0.14698 R² difference (PGS+covariates vs. covariates only): 0.04998 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000678 | PGS000273 (PAR-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Proteinase-activated receptor 1 (PAR-1) serum levels | — | — | R²: 0.01206 R² difference (PGS+covariates vs. covariates only): 0.00906 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000668 | PGS000274 (PDGF_subunit_B) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Platelet-derived growth factor subunit B (PDGF_subunit_B) serum levels | — | — | R²: 0.00734 R² difference (PGS+covariates vs. covariates only): 0.00434 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000725 | PGS000275 (PECAM-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Platelet endothelial cell adhesion molecule (PECAM-1) serum levels | — | — | R²: 0.07059 R² difference (PGS+covariates vs. covariates only): 0.05759 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000671 | PGS000276 (PlGF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Placenta growth factor (PlGF) serum levels | — | — | R²: 0.09579 R² difference (PGS+covariates vs. covariates only): 0.00679 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000682 | PGS000277 (PSGL-1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: P-selectin glycoprotein ligand 1 (PSGL-1) serum levels | — | — | R²: 0.01086 R² difference (PGS+covariates vs. covariates only): 0.01086 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000708 | PGS000278 (PTX3) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Pentraxin-related protein PTX3 (PTX3) serum levels | — | — | R²: 0.03012 R² difference (PGS+covariates vs. covariates only): 0.02812 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000705 | PGS000279 (RAGE) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Receptor for advanced glycosylation end products (RAGE) serum levels | — | — | R²: 0.04312 R² difference (PGS+covariates vs. covariates only): 0.02712 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000673 | PGS000280 (REN) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Renin (REN) serum levels | — | — | R²: 0.08537 R² difference (PGS+covariates vs. covariates only): 0.00737 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000709 | PGS000281 (RETN) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Resistin (RETN) serum levels | — | — | R²: 0.04427 R² difference (PGS+covariates vs. covariates only): 0.03327 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000723 | PGS000282 (SCF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Stem cell factor (SCF) serum levels | — | — | R²: 0.05956 R² difference (PGS+covariates vs. covariates only): 0.05256 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000706 | PGS000283 (SPON1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Spondin-1 (SPON1) serum levels | — | — | R²: 0.06873 R² difference (PGS+covariates vs. covariates only): 0.02773 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000741 | PGS000284 (ST2) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: ST2 protein (ST2) serum levels | — | — | R²: 0.32939 R² difference (PGS+covariates vs. covariates only): 0.19039 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000727 | PGS000285 (TF) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tissue factor (TF) serum levels | — | — | R²: 0.10251 R² difference (PGS+covariates vs. covariates only): 0.06551 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000710 | PGS000286 (TM) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Thrombomodulin (TM) serum levels | — | — | R²: 0.08819 R² difference (PGS+covariates vs. covariates only): 0.03619 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000676 | PGS000287 (TNF-R1) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tumor necrosis factor receptor 1 (TNF-R1) serum levels | — | — | R²: 0.06801 R² difference (PGS+covariates vs. covariates only): 0.00801 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000688 | PGS000288 (TNF-R2) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tumor necrosis factor receptor 2 (TNF-R2) serum levels | — | — | R²: 0.05136 R² difference (PGS+covariates vs. covariates only): 0.01336 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000713 | PGS000289 (TNFSF14) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Tumor necrosis factor ligand superfamily member 14 (TNFSF14) serum levels | — | — | R²: 0.04311 R² difference (PGS+covariates vs. covariates only): 0.03911 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000724 | PGS000290 (TRAIL) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: TNF-related apoptosis-inducing ligand (TRAIL) serum levels | — | — | R²: 0.11259 R² difference (PGS+covariates vs. covariates only): 0.05259 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000716 | PGS000291 (TRAIL-R2) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: TNF-related apoptosis-inducing ligand receptor 2 (TRAIL-R2) serum levels | — | — | R² difference (PGS+covariates vs. covariates only): 0.04464 R²: 0.05164 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000715 | PGS000292 (TRANCE) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: TNF-related activation-induced cytokine (TRANCE) serum levels | — | — | R²: 0.0487 R² difference (PGS+covariates vs. covariates only): 0.0427 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000690 | PGS000293 (U-PAR) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Urokinase plasminogen activator surface receptor (U-PAR) serum levels | — | — | R²: 0.03628 R² difference (PGS+covariates vs. covariates only): 0.01428 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000732 | PGS000294 (VEGF-A) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Vascular endothelial growth factor A (VEGF-A) serum levels | — | — | R²: 0.10967 R² difference (PGS+covariates vs. covariates only): 0.08967 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM000700 | PGS000295 (VEGF-D) |
PSS000364| European Ancestry| 4,678 individuals |
PGP000089 | Folkersen L et al. Nat Metab (2020) |
Reported Trait: Vascular endothelial growth factor D (VEGF-D) serum levels | — | — | R²: 0.0429 R² difference (PGS+covariates vs. covariates only): 0.0219 |
age + sex + 10 genetic PCs | The main manuscript further reports scores divided into genome-wide significant loci (major loci) and remaining polygenic loci, but this performance metric just reports the sum of both. |
| PPM008163 | PGS001081 (GBE_INI23027) |
PSS005026| African Ancestry| 119 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: JC VP1 antigen for Human Polyomavirus JCV | — | — | R²: 0.12869 [0.11349, 0.14388] Incremental R2 (full-covars): 0.01063 PGS R2 (no covariates): 0.01501 [0.00914, 0.02087] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008164 | PGS001081 (GBE_INI23027) |
PSS005027| East Asian Ancestry| 41 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: JC VP1 antigen for Human Polyomavirus JCV | — | — | R²: 0.29085 [0.2546, 0.32709] Incremental R2 (full-covars): 0.00221 PGS R2 (no covariates): 0.02124 [0.00772, 0.03476] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008165 | PGS001081 (GBE_INI23027) |
PSS005028| European Ancestry| 471 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: JC VP1 antigen for Human Polyomavirus JCV | — | — | R²: 0.06173 [0.05594, 0.06752] Incremental R2 (full-covars): 0.03591 PGS R2 (no covariates): 0.03303 [0.02867, 0.0374] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008166 | PGS001081 (GBE_INI23027) |
PSS005029| South Asian Ancestry| 164 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: JC VP1 antigen for Human Polyomavirus JCV | — | — | R²: 0.13865 [0.12444, 0.15285] Incremental R2 (full-covars): 0.02165 PGS R2 (no covariates): 0.02983 [0.02241, 0.03725] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008167 | PGS001081 (GBE_INI23027) |
PSS005030| European Ancestry| 1,275 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: JC VP1 antigen for Human Polyomavirus JCV | — | — | R²: 0.03787 [0.03505, 0.0407] Incremental R2 (full-covars): 0.03172 PGS R2 (no covariates): 0.03585 [0.0331, 0.03861] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008168 | PGS001082 (GBE_INI23028) |
PSS005031| African Ancestry| 119 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: MC VP1 antigen for Merkel Cell Polyomavirus | — | — | R²: 0.10713 [0.09292, 0.12133] Incremental R2 (full-covars): -0.0241 PGS R2 (no covariates): 0.00153 [-0.00037, 0.00343] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008169 | PGS001082 (GBE_INI23028) |
PSS005032| East Asian Ancestry| 41 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: MC VP1 antigen for Merkel Cell Polyomavirus | — | — | R²: 0.39043 [0.35434, 0.42653] Incremental R2 (full-covars): -0.00937 PGS R2 (no covariates): 0.00795 [-0.00043, 0.01633] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008170 | PGS001082 (GBE_INI23028) |
PSS005033| European Ancestry| 471 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: MC VP1 antigen for Merkel Cell Polyomavirus | — | — | R²: 0.09403 [0.08713, 0.10093] Incremental R2 (full-covars): 0.06025 PGS R2 (no covariates): 0.08198 [0.07546, 0.08851] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008171 | PGS001082 (GBE_INI23028) |
PSS005034| South Asian Ancestry| 164 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: MC VP1 antigen for Merkel Cell Polyomavirus | — | — | R²: 0.08623 [0.07435, 0.09811] Incremental R2 (full-covars): 0.01085 PGS R2 (no covariates): 0.00773 [0.00387, 0.0116] |
age, sex, UKB array type, Genotype PCs | — |
| PPM008172 | PGS001082 (GBE_INI23028) |
PSS005035| European Ancestry| 1,275 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: MC VP1 antigen for Merkel Cell Polyomavirus | — | — | R²: 0.05319 [0.04989, 0.05648] Incremental R2 (full-covars): 0.04747 PGS R2 (no covariates): 0.04937 [0.04618, 0.05256] |
age, sex, UKB array type, Genotype PCs | — |
| PPM005345 | PGS001407 (GBE_INI23022) |
PSS005021| African Ancestry| 119 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | — | — | R²: 0.18173 [0.16477, 0.19868] Incremental R2 (full-covars): 0.00586 PGS R2 (no covariates): 0.02091 [0.01403, 0.02779] |
age, sex, UKB array type, Genotype PCs | — |
| PPM005346 | PGS001407 (GBE_INI23022) |
PSS005022| East Asian Ancestry| 41 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | — | — | R²: 0.22757 [0.19265, 0.26249] Incremental R2 (full-covars): 0.01155 PGS R2 (no covariates): 0.00849 [-0.00017, 0.01714] |
age, sex, UKB array type, Genotype PCs | — |
| PPM005347 | PGS001407 (GBE_INI23022) |
PSS005023| European Ancestry| 471 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | — | — | R²: 0.08759 [0.08088, 0.0943] Incremental R2 (full-covars): 0.02612 PGS R2 (no covariates): 0.03168 [0.0274, 0.03596] |
age, sex, UKB array type, Genotype PCs | — |
| PPM005348 | PGS001407 (GBE_INI23022) |
PSS005024| South Asian Ancestry| 164 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | — | — | Incremental R2 (full-covars): 0.0038 R²: 0.22286 [0.20661, 0.2391] PGS R2 (no covariates): 0.01447 [0.00922, 0.01972] |
age, sex, UKB array type, Genotype PCs | — |
| PPM005349 | PGS001407 (GBE_INI23022) |
PSS005025| European Ancestry| 1,275 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: HTLV-1 gag antigen for Human T-Lymphotropic Virus 1 | — | — | R²: 0.03666 [0.03387, 0.03944] Incremental R2 (full-covars): 0.01644 PGS R2 (no covariates): 0.01753 [0.01557, 0.0195] |
age, sex, UKB array type, Genotype PCs | — |
|
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
|---|---|---|---|---|---|---|---|---|
| PSS000364 | — | — | 4,678 individuals | — | European (Swedish) |
— | MDC | — |
| PSS005021 | — | — | 119 individuals | — | African unspecified | — | UKB | — |
| PSS005022 | — | — | 41 individuals | — | East Asian | — | UKB | — |
| PSS005023 | — | — | 471 individuals | — | European | non-white British ancestry | UKB | — |
| PSS005024 | — | — | 164 individuals | — | South Asian | — | UKB | — |
| PSS005026 | — | — | 119 individuals | — | African unspecified | — | UKB | — |
| PSS005027 | — | — | 41 individuals | — | East Asian | — | UKB | — |
| PSS005028 | — | — | 471 individuals | — | European | non-white British ancestry | UKB | — |
| PSS005029 | — | — | 164 individuals | — | South Asian | — | UKB | — |
| PSS005030 | — | — | 1,275 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
| PSS005031 | — | — | 119 individuals | — | African unspecified | — | UKB | — |
| PSS005032 | — | — | 41 individuals | — | East Asian | — | UKB | — |
| PSS005033 | — | — | 471 individuals | — | European | non-white British ancestry | UKB | — |
| PSS005034 | — | — | 164 individuals | — | South Asian | — | UKB | — |
| PSS005035 | — | — | 1,275 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
| PSS005025 | — | — | 1,275 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |