Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0004713 | Trait category |
Other measurement
|
Synonyms |
3 synonyms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS000210 (LF279) |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 279 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000210/ScoringFiles/PGS000210.txt.gz |
PGS001180 (GBE_INI1003063) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 15,141 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001180/ScoringFiles/PGS001180.txt.gz |
PGS001801 (PRS_Ratio) |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
FEV1/FVC ratio | FEV/FVC ratio | 1,232,916 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001801/ScoringFiles/PGS001801.txt.gz | |
PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 1,109,311 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002326/ScoringFiles/PGS002326.txt.gz |
PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 12,645 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002398/ScoringFiles/PGS002398.txt.gz |
PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 33,367 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002447/ScoringFiles/PGS002447.txt.gz |
PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 139,123 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002496/ScoringFiles/PGS002496.txt.gz |
PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 4,165 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002545/ScoringFiles/PGS002545.txt.gz |
PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 2,609 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002594/ScoringFiles/PGS002594.txt.gz |
PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 508,629 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002643/ScoringFiles/PGS002643.txt.gz |
PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 985,212 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002692/ScoringFiles/PGS002692.txt.gz |
PGS003465 (LDPred2_FEV1FVC) |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 835,705 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003465/ScoringFiles/PGS003465.txt.gz |
PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 442 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003862/ScoringFiles/PGS003862.txt.gz |
PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 437 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003863/ScoringFiles/PGS003863.txt.gz |
PGS003864 (multiancestry_LF_GRS_FF_weights_AMR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 434 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003864/ScoringFiles/PGS003864.txt.gz |
PGS003865 (multiancestry_LF_GRS_FF_weights_EAS) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 406 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003865/ScoringFiles/PGS003865.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM000638 | PGS000210 (LF279) |
PSS000345| East Asian Ancestry| 75,580 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.219 [1.182, 1.256] | — | — | age, age^2, sex, height, smoking | Models were stratified by geographical region and meta-analyzed. 12 Proxy SNPs were used |
PPM000636 | PGS000210 (LF279) |
PSS000348| European Ancestry| 303,570 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.436 [1.411, 1.461] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | *Potential inflation (some weights are derived in a UKB GWAS) |
PPM000645 | PGS000210 (LF279) |
PSS000351| East Asian Ancestry| 72,796 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.078 [-0.085, -0.071] | — | — | age, age^2, sex, height, smoking | Models were stratified by geographical region and meta-analyzed. 12 Proxy SNPs were used |
PPM000647 | PGS000210 (LF279) |
PSS000346| European Ancestry| 10,894 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.546 [1.476, 1.62] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000642 | PGS000210 (LF279) |
PSS000355| European Ancestry| 303,570 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.224 [-0.227, -0.221] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | *Potential inflation (some weights are derived in a UKB GWAS) |
PPM000643 | PGS000210 (LF279) |
PSS000353| Additional Diverse Ancestries| 1,208 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.176 [-0.231, -0.12] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000641 | PGS000210 (LF279) |
PSS000354| East Asian Ancestry| 1,607 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.142 [-0.191, -0.093] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000640 | PGS000210 (LF279) |
PSS000357| South Asian Ancestry| 6,358 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.181 [-0.205, -0.156] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000639 | PGS000210 (LF279) |
PSS000352| African Ancestry| 4,225 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.086 [-0.116, -0.056] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000644 | PGS000210 (LF279) |
PSS000356| Additional Diverse Ancestries| 6,033 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.186 [-0.211, -0.162] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000637 | PGS000210 (LF279) |
PSS000349| Additional Diverse Ancestries| 6,033 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.506 [1.325, 1.712] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000635 | PGS000210 (LF279) |
PSS000350| South Asian Ancestry| 6,358 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.414 [1.254, 1.594] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000634 | PGS000210 (LF279) |
PSS000347| African Ancestry| 4,225 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.348 [1.152, 1.577] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000646 | PGS000210 (LF279) |
PSS000344| African Ancestry| 2,466 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.255 [1.147, 1.374] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM014853 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥0) | OR: 1.66 [1.55, 1.79] β: 0.5096 (0.0372) |
— | — | — | — |
PPM014845 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥0) | OR: 1.57 [1.48, 1.67] β: 0.4524 (0.0304) |
— | — | — | — |
PPM014846 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥0) | OR: 1.24 [1.14, 1.36] β: 0.2191 (0.0436) |
— | — | — | — |
PPM014847 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.69 [1.36, 2.11] β: 0.5271 (0.1112) |
— | — | — | — |
PPM014848 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.33 [1.05, 1.7] β: 0.2872 (0.1233) |
— | — | — | — |
PPM014849 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.64 [1.49, 1.82] β: 0.4971 (0.0506) |
— | — | — | — |
PPM014854 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥0) | OR: 1.35 [1.2, 1.52] β: 0.2994 (0.0609) |
— | — | — | — |
PPM014855 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.85 [1.37, 2.5] β: 0.6155 (0.1527) |
— | — | — | — |
PPM014856 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.31 [0.87, 1.96] β: 0.2667 (0.2061) |
— | — | — | — |
PPM014850 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.35 [1.18, 1.53] β: 0.2968 (0.0653) |
— | — | — | — |
PPM014851 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥40) | OR: 1.52 [1.4, 1.65] β: 0.4211 (0.042) |
— | — | — | — |
PPM014859 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥40) | OR: 1.61 [1.46, 1.77] β: 0.4762 (0.0488) |
— | — | — | — |
PPM014860 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥40) | OR: 1.18 [0.98, 1.41] β: 0.1638 (0.0931) |
— | — | — | — |
PPM014861 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥0) | β: -2.8878 (0.1597) | — | R²: 0.0361 [0.0144, 0.0578] | — | — |
PPM014862 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥0) | β: -1.2526 (0.1985) | — | R²: 0.0111 [-0.0214, 0.0436] | — | — |
PPM014863 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [0,20)) | β: -2.6173 (0.448) | — | R²: 0.0361 [-0.0337, 0.1059] | — | — |
PPM014864 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [0,20)) | β: -0.6558 (0.4221) | — | R²: 0.0036 [-0.0741, 0.0813] | — | — |
PPM014865 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [20,40)) | β: -3.2512 (0.2601) | — | R²: 0.0464 [0.0087, 0.0841] | — | — |
PPM014866 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [20,40)) | β: -1.5655 (0.2858) | — | R²: 0.0199 [-0.0285, 0.0683] | — | — |
PPM014867 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥40) | β: -2.7449 (0.2221) | — | R²: 0.0315 [0.0028, 0.0602] | — | — |
PPM014868 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥40) | β: -1.1647 (0.3587) | — | R²: 0.0083 [-0.045, 0.0616] | — | — |
PPM014869 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥0) | β: -0.131 (0.0081) | — | R²: 0.0301 [0.0084, 0.0518] | — | — |
PPM014870 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥0) | β: -0.036 (0.0105) | — | R²: 0.0028 [-0.0297, 0.0353] | — | — |
PPM014872 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [0,20)) | β: -0.0365 (0.024) | — | R²: 0.0036 [-0.0741, 0.0813] | — | — |
PPM014873 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [20,40)) | β: -0.1382 (0.0137) | — | R²: 0.0326 [-0.0051, 0.0703] | — | — |
PPM014874 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [20,40)) | β: -0.0518 (0.0153) | — | R²: 0.0063 [-0.0421, 0.0547] | — | — |
PPM014875 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥40) | β: -0.1272 (0.0109) | — | R²: 0.0288 [0.0001, 0.0575] | — | — |
PPM014876 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥40) | β: -0.0142 (0.0183) | — | R²: 0.0004 [-0.0529, 0.0537] | — | — |
PPM014852 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥40) | OR: 1.1 [0.96, 1.26] β: 0.0963 (0.0706) |
— | — | — | — |
PPM014857 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.75 [1.54, 2.0] β: 0.5621 (0.0664) |
— | — | — | — |
PPM014858 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.5 [1.24, 1.8] β: 0.4023 (0.0958) |
— | — | — | — |
PPM014871 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [0,20)) | β: -0.1204 (0.0248) | — | R²: 0.0256 [-0.0442, 0.0954] | — | — |
PPM022298 | PGS000210 (LF279) |
PSS011909| European Ancestry| 287,868 individuals |
PGP000699 | Li S et al. Diabetes Obes Metab (2023) |Ext. |
Reported Trait: Chronic obstructive pulmonary disease | — | — | Hazard ratio (HR, high vs low PGS tertile): 1.17 [1.1, 1.24] | Age, sex, body mass index, height, household income, education level, Townsend deprivation index, physical activity, family history of diseases (hypertension, cardiovascular disease, and diabetes), smoking status, drinking status, healthy diet score, passive smoking, air pollution, family history of COPD, baseline forced expiratory volume in 1s / forced vital capacity ratio, asthma, metabolic syndrome, 10 PCs, genotype batch | — |
PPM008589 | PGS001180 (GBE_INI1003063) |
PSS004771| African Ancestry| 5,852 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.01124 [0.00614, 0.01633] Incremental R2 (full-covars): -0.00411 PGS R2 (no covariates): 0.00217 [-0.00009, 0.00443] |
age, sex, UKB array type, Genotype PCs | — |
PPM008590 | PGS001180 (GBE_INI1003063) |
PSS004772| East Asian Ancestry| 1,587 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.04374 [0.02479, 0.06269] Incremental R2 (full-covars): 0.02108 PGS R2 (no covariates): 0.02152 [0.00792, 0.03513] |
age, sex, UKB array type, Genotype PCs | — |
PPM008591 | PGS001180 (GBE_INI1003063) |
PSS004773| European Ancestry| 22,763 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.09646 [0.08949, 0.10343] Incremental R2 (full-covars): 0.04766 PGS R2 (no covariates): 0.05063 [0.04532, 0.05593] |
age, sex, UKB array type, Genotype PCs | — |
PPM008592 | PGS001180 (GBE_INI1003063) |
PSS004774| South Asian Ancestry| 7,136 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.04322 [0.03442, 0.05203] Incremental R2 (full-covars): 0.01609 PGS R2 (no covariates): 0.01838 [0.01249, 0.02427] |
age, sex, UKB array type, Genotype PCs | — |
PPM008593 | PGS001180 (GBE_INI1003063) |
PSS004775| European Ancestry| 61,887 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.11465 [0.11013, 0.11918] Incremental R2 (full-covars): 0.05769 PGS R2 (no covariates): 0.06034 [0.05685, 0.06382] |
age, sex, UKB array type, Genotype PCs | — |
PPM009320 | PGS001801 (PRS_Ratio) |
PSS007722| European Ancestry| 19,229 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: Chronic obstructive pulmonary disease (moderate-to-severe) | — | — | Odds Ratio of Combined PRS (OR): 1.81 [1.74, 1.88) | Age, sex, height, smoking pack-years, PCs of genetic ancestry, study clinic, PRS_FEV1 | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-score |
PPM009321 | PGS001801 (PRS_Ratio) |
PSS007723| Multi-ancestry (excluding European)| 7,122 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: Chronic obstructive pulmonary disease (moderate-to-severe) | — | — | Odds Ratio of Combined PRS (OR): 1.42 [1.34, 1.51) | Age, sex, height, smoking pack-years, PCs of genetic ancestry, study clinic, PRS_FEV1 | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-score |
PPM009317 | PGS001801 (PRS_Ratio) |
PSS007721| European Ancestry| 5,175 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: GOLD spirometry grades | — | — | Association (p-value): 2.02e-69 | — | — |
PPM015566 | PGS001801 (PRS_Ratio) |
PSS009985| European Ancestry| 6,647 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 1.55 [1.41, 1.71] | AUROC: 0.739 [0.718, 0.761] | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM015567 | PGS001801 (PRS_Ratio) |
PSS009983| African Ancestry| 2,464 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 1.23 [1.05, 1.43] | AUROC: 0.635 [0.595, 0.675] | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM015568 | PGS001801 (PRS_Ratio) |
PSS009984| European Ancestry| 6,812 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 2.47 [2.12, 2.88] | — | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM013091 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0321 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013140 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0411 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013238 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0732 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013189 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.1332 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013379 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013428 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0242 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013477 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0766 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013526 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0316 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013722 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0272 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013575 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013624 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0144 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013673 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0763 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013771 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013820 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0068 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013869 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0235 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013918 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0058 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013967 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0125 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014016 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0364 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014065 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0635 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014114 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.031 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014163 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0179 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014212 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0328 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014261 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0551 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014310 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0277 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014408 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0481 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014359 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0403 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014457 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.1362 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014506 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0736 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014555 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0379 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014604 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0601 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014653 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.1281 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014702 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0738 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM017275 | PGS003465 (LDPred2_FEV1FVC) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index | β: -0.01 (0.01) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017298 | PGS003465 (LDPred2_FEV1FVC) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea | β: -0.042 (0.024) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM018752 | PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PSS011096| European Ancestry| 320,656 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.2787 [0.2753, 0.282] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018756 | PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PSS011092| European Ancestry| 11,074 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.63 [1.56, 1.71] | — | — | age, age^2, sex, height, smoking | — |
PPM018753 | PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PSS011093| African Ancestry| 4,227 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.1534 [0.1106, 0.1961] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018757 | PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PSS011091| African Ancestry| 2,886 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.23 [1.13, 1.34] | — | — | age, age^2, sex, height, smoking | — |
PPM018754 | PGS003864 (multiancestry_LF_GRS_FF_weights_AMR) |
PSS011094| Hispanic or Latin American Ancestry| 2,798 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.254 [0.2163, 0.2917] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018755 | PGS003865 (multiancestry_LF_GRS_FF_weights_EAS) |
PSS011095| East Asian Ancestry| 1,564 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.196 [0.1203, 0.2716] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS000352 | — | — | 4,225 individuals | — | African unspecified | — | UKB | — |
PSS000353 | — | — | 1,208 individuals | — | Other admixed ancestry (Admixed African (unspecified) and European) |
— | UKB | — |
PSS000354 | — | — | 1,607 individuals | — | East Asian | — | UKB | — |
PSS000355 | — | — | 303,570 individuals | — | European | — | UKB | — |
PSS000356 | — | — | 6,033 individuals | — | Other admixed ancestry | — | UKB | — |
PSS000357 | — | — | 6,358 individuals | — | South Asian | — | UKB | — |
PSS009915 | — | — | 8,144 individuals | — | European (Non Hispanic White) |
— | COPDGene, SPIROMICS | — |
PSS009914 | — | — | 3,627 individuals | — | African American or Afro-Caribbean (African American) |
— | COPDGene, SPIROMICS | — |
PSS009747 | — | — | 4,243 individuals | — | African unspecified | — | UKB | — |
PSS009748 | — | — | 679 individuals | — | East Asian | — | UKB | — |
PSS009750 | — | — | 5,538 individuals | — | South Asian | — | UKB | — |
PSS009749 | — | — | 34,753 individuals | — | European | Non-British European | UKB | — |
PSS011096 | — | — | 320,656 individuals | — | European | — | UKB | — |
PSS011095 | — | — | 1,564 individuals | — | East Asian | — | UKB | — |
PSS010185 | — | — | 1,115 individuals, 41.1 % Male samples |
Mean = 46.18 years | Hispanic or Latin American | — | HCHS, SOL | — |
PSS011909 | — | Mean = 9.24 years | [ ,
44.26 % Male samples |
— | European | — | UKB | — |
PSS009983 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 2,464 individuals, 57.6 % Male samples |
— | African American or Afro-Caribbean (African American) |
— | COPDGene | — |
PSS009984 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 6,812 individuals | — | European | — | FHS | — |
PSS009985 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 6,647 individuals, 52.3 % Male samples |
— | European (Non-Hispanic White) |
— | COPDGene | — |
PSS011094 | — | — | 2,798 individuals | — | Hispanic or Latin American | — | UKB | — |
PSS007721 | — | — | 5,175 individuals, 52.27 % Male samples |
— | European | — | COPDGene | — |
PSS007722 | — | — | [ ,
52.27 % Male samples |
— | European | — | COPDGene | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
36.19 % Male samples |
— | European | — | CHS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
66.34 % Male samples |
— | European | — | ECLIPSE | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
63.74 % Male samples |
— | European | — | LHS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
47.66 % Male samples |
— | European | — | MESA | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
83.12 % Male samples |
— | European | — | NAS, NETT | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
42.87 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
46.73 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
43.36 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
52.85 % Male samples |
— | European | — | SPIROMICS | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
57.62 % Male samples |
— | African American or Afro-Caribbean | — | COPDGene | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
34.49 % Male samples |
— | African American or Afro-Caribbean | — | CHS | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
74.56 % Male samples |
— | Not reported | — | NR | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
46.58 % Male samples |
— | African American or Afro-Caribbean | — | MESA | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
49.89 % Male samples |
— | East Asian | — | MESA | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
47.26 % Male samples |
— | Hispanic or Latin American | — | MESA | Fixed-effects meta-analysis |
PSS004771 | — | — | 5,852 individuals | — | African unspecified | — | UKB | — |
PSS004772 | — | — | 1,587 individuals | — | East Asian | — | UKB | — |
PSS004773 | — | — | 22,763 individuals | — | European | non-white British ancestry | UKB | — |
PSS004774 | — | — | 7,136 individuals | — | South Asian | — | UKB | — |
PSS004775 | — | — | 61,887 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS011091 | — | — | [
|
— | African unspecified | — | COPDGene, SPIROMICS | — |
PSS011092 | — | — | [
|
— | European | — | 6 cohorts
|
— |
PSS011093 | — | — | 4,227 individuals | — | African unspecified | — | UKB | — |
PSS000344 | — | — | [
|
— | African American or Afro-Caribbean | — | COPDGene | — |
PSS000345 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | East Asian (Chinese) |
— | CKB | — |
PSS000346 | — | — | [
|
— | European | — | 6 cohorts
|
— |
PSS000347 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | African unspecified | — | UKB | — |
PSS000348 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | European | — | UKB | — |
PSS000349 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | Other admixed ancestry | — | UKB | — |
PSS000350 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | South Asian | — | UKB | — |
PSS000351 | — | — | 72,796 individuals | — | East Asian (Chinese) |
— | CKB | — |