Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0004713 | Trait category |
Other measurement
|
Synonyms |
3 synonyms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS000210 (LF279) |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 279 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000210/ScoringFiles/PGS000210.txt.gz |
PGS001180 (GBE_INI1003063) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 15,141 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001180/ScoringFiles/PGS001180.txt.gz |
PGS001801 (PRS_Ratio) |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
FEV1/FVC ratio | FEV/FVC ratio | 1,232,916 | https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001801/ScoringFiles/PGS001801.txt.gz | |
PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 1,109,311 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002326/ScoringFiles/PGS002326.txt.gz |
PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 12,645 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002398/ScoringFiles/PGS002398.txt.gz |
PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 33,367 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002447/ScoringFiles/PGS002447.txt.gz |
PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 139,123 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002496/ScoringFiles/PGS002496.txt.gz |
PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 4,165 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002545/ScoringFiles/PGS002545.txt.gz |
PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 2,609 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002594/ScoringFiles/PGS002594.txt.gz |
PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 508,629 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002643/ScoringFiles/PGS002643.txt.gz |
PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 985,212 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002692/ScoringFiles/PGS002692.txt.gz |
PGS003465 (LDPred2_FEV1FVC) |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
FEV1/FVC ratio | FEV/FVC ratio | 835,705 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003465/ScoringFiles/PGS003465.txt.gz |
PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 442 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003862/ScoringFiles/PGS003862.txt.gz |
PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 437 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003863/ScoringFiles/PGS003863.txt.gz |
PGS003864 (multiancestry_LF_GRS_FF_weights_AMR) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 434 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003864/ScoringFiles/PGS003864.txt.gz |
PGS003865 (multiancestry_LF_GRS_FF_weights_EAS) |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Lung function (FEV1/FVC) | FEV/FVC ratio | 406 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003865/ScoringFiles/PGS003865.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM000638 | PGS000210 (LF279) |
PSS000345| East Asian Ancestry| 75,580 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.219 [1.182, 1.256] | — | — | age, age^2, sex, height, smoking | Models were stratified by geographical region and meta-analyzed. 12 Proxy SNPs were used |
PPM000636 | PGS000210 (LF279) |
PSS000348| European Ancestry| 303,570 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.436 [1.411, 1.461] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | *Potential inflation (some weights are derived in a UKB GWAS) |
PPM000645 | PGS000210 (LF279) |
PSS000351| East Asian Ancestry| 72,796 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.078 [-0.085, -0.071] | — | — | age, age^2, sex, height, smoking | Models were stratified by geographical region and meta-analyzed. 12 Proxy SNPs were used |
PPM000647 | PGS000210 (LF279) |
PSS000346| European Ancestry| 10,894 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.546 [1.476, 1.62] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000642 | PGS000210 (LF279) |
PSS000355| European Ancestry| 303,570 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.224 [-0.227, -0.221] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | *Potential inflation (some weights are derived in a UKB GWAS) |
PPM000643 | PGS000210 (LF279) |
PSS000353| Additional Diverse Ancestries| 1,208 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.176 [-0.231, -0.12] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000641 | PGS000210 (LF279) |
PSS000354| East Asian Ancestry| 1,607 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.142 [-0.191, -0.093] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000640 | PGS000210 (LF279) |
PSS000357| South Asian Ancestry| 6,358 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.181 [-0.205, -0.156] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000639 | PGS000210 (LF279) |
PSS000352| African Ancestry| 4,225 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.086 [-0.116, -0.056] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000644 | PGS000210 (LF279) |
PSS000356| Additional Diverse Ancestries| 6,033 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Lung Function (FEV1/FVC) | β: -0.186 [-0.211, -0.162] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000637 | PGS000210 (LF279) |
PSS000349| Additional Diverse Ancestries| 6,033 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.506 [1.325, 1.712] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000635 | PGS000210 (LF279) |
PSS000350| South Asian Ancestry| 6,358 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.414 [1.254, 1.594] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000634 | PGS000210 (LF279) |
PSS000347| African Ancestry| 4,225 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.348 [1.152, 1.577] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM000646 | PGS000210 (LF279) |
PSS000344| African Ancestry| 2,466 individuals |
PGP000086 | Shrine N et al. Nat Genet (2019) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.255 [1.147, 1.374] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | — |
PPM014853 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥0) | OR: 1.66 [1.55, 1.79] β: 0.5096 (0.0372) |
— | — | — | — |
PPM014845 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥0) | OR: 1.57 [1.48, 1.67] β: 0.4524 (0.0304) |
— | — | — | — |
PPM014846 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥0) | OR: 1.24 [1.14, 1.36] β: 0.2191 (0.0436) |
— | — | — | — |
PPM014847 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.69 [1.36, 2.11] β: 0.5271 (0.1112) |
— | — | — | — |
PPM014848 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.33 [1.05, 1.7] β: 0.2872 (0.1233) |
— | — | — | — |
PPM014849 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.64 [1.49, 1.82] β: 0.4971 (0.0506) |
— | — | — | — |
PPM014854 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥0) | OR: 1.35 [1.2, 1.52] β: 0.2994 (0.0609) |
— | — | — | — |
PPM014855 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.85 [1.37, 2.5] β: 0.6155 (0.1527) |
— | — | — | — |
PPM014856 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [0,20)) | OR: 1.31 [0.87, 1.96] β: 0.2667 (0.2061) |
— | — | — | — |
PPM014850 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.35 [1.18, 1.53] β: 0.2968 (0.0653) |
— | — | — | — |
PPM014851 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥40) | OR: 1.52 [1.4, 1.65] β: 0.4211 (0.042) |
— | — | — | — |
PPM014859 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥40) | OR: 1.61 [1.46, 1.77] β: 0.4762 (0.0488) |
— | — | — | — |
PPM014860 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years ≥40) | OR: 1.18 [0.98, 1.41] β: 0.1638 (0.0931) |
— | — | — | — |
PPM014861 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥0) | β: -2.8878 (0.1597) | — | R²: 0.0361 [0.0144, 0.0578] | — | — |
PPM014862 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥0) | β: -1.2526 (0.1985) | — | R²: 0.0111 [-0.0214, 0.0436] | — | — |
PPM014863 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [0,20)) | β: -2.6173 (0.448) | — | R²: 0.0361 [-0.0337, 0.1059] | — | — |
PPM014864 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [0,20)) | β: -0.6558 (0.4221) | — | R²: 0.0036 [-0.0741, 0.0813] | — | — |
PPM014865 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [20,40)) | β: -3.2512 (0.2601) | — | R²: 0.0464 [0.0087, 0.0841] | — | — |
PPM014866 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years: [20,40)) | β: -1.5655 (0.2858) | — | R²: 0.0199 [-0.0285, 0.0683] | — | — |
PPM014867 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥40) | β: -2.7449 (0.2221) | — | R²: 0.0315 [0.0028, 0.0602] | — | — |
PPM014868 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1/FVC ratio (Smoking Pack-Years ≥40) | β: -1.1647 (0.3587) | — | R²: 0.0083 [-0.045, 0.0616] | — | — |
PPM014869 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥0) | β: -0.131 (0.0081) | — | R²: 0.0301 [0.0084, 0.0518] | — | — |
PPM014870 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥0) | β: -0.036 (0.0105) | — | R²: 0.0028 [-0.0297, 0.0353] | — | — |
PPM014872 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [0,20)) | β: -0.0365 (0.024) | — | R²: 0.0036 [-0.0741, 0.0813] | — | — |
PPM014873 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [20,40)) | β: -0.1382 (0.0137) | — | R²: 0.0326 [-0.0051, 0.0703] | — | — |
PPM014874 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [20,40)) | β: -0.0518 (0.0153) | — | R²: 0.0063 [-0.0421, 0.0547] | — | — |
PPM014875 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥40) | β: -0.1272 (0.0109) | — | R²: 0.0288 [0.0001, 0.0575] | — | — |
PPM014876 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years ≥40) | β: -0.0142 (0.0183) | — | R²: 0.0004 [-0.0529, 0.0537] | — | — |
PPM014852 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Moderate to severe COPD (Smoking Pack-Years ≥40) | OR: 1.1 [0.96, 1.26] β: 0.0963 (0.0706) |
— | — | — | — |
PPM014857 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.75 [1.54, 2.0] β: 0.5621 (0.0664) |
— | — | — | — |
PPM014858 | PGS000210 (LF279) |
PSS009914| African Ancestry| 3,627 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: Severe COPD (Smoking Pack-Years: [20,40)) | OR: 1.5 [1.24, 1.8] β: 0.4023 (0.0958) |
— | — | — | — |
PPM014871 | PGS000210 (LF279) |
PSS009915| European Ancestry| 8,144 individuals |
PGP000348 | Hu X et al. Am J Hum Genet (2022) |Ext. |
Reported Trait: FEV1 (Smoking Pack-Years: [0,20)) | β: -0.1204 (0.0248) | — | R²: 0.0256 [-0.0442, 0.0954] | — | — |
PPM008589 | PGS001180 (GBE_INI1003063) |
PSS004771| African Ancestry| 5,852 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.01124 [0.00614, 0.01633] Incremental R2 (full-covars): -0.00411 PGS R2 (no covariates): 0.00217 [-0.00009, 0.00443] |
age, sex, UKB array type, Genotype PCs | — |
PPM008590 | PGS001180 (GBE_INI1003063) |
PSS004772| East Asian Ancestry| 1,587 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.04374 [0.02479, 0.06269] Incremental R2 (full-covars): 0.02108 PGS R2 (no covariates): 0.02152 [0.00792, 0.03513] |
age, sex, UKB array type, Genotype PCs | — |
PPM008591 | PGS001180 (GBE_INI1003063) |
PSS004773| European Ancestry| 22,763 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.09646 [0.08949, 0.10343] Incremental R2 (full-covars): 0.04766 PGS R2 (no covariates): 0.05063 [0.04532, 0.05593] |
age, sex, UKB array type, Genotype PCs | — |
PPM008592 | PGS001180 (GBE_INI1003063) |
PSS004774| South Asian Ancestry| 7,136 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.04322 [0.03442, 0.05203] Incremental R2 (full-covars): 0.01609 PGS R2 (no covariates): 0.01838 [0.01249, 0.02427] |
age, sex, UKB array type, Genotype PCs | — |
PPM008593 | PGS001180 (GBE_INI1003063) |
PSS004775| European Ancestry| 61,887 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: FEV FVC ratio | — | — | R²: 0.11465 [0.11013, 0.11918] Incremental R2 (full-covars): 0.05769 PGS R2 (no covariates): 0.06034 [0.05685, 0.06382] |
age, sex, UKB array type, Genotype PCs | — |
PPM009320 | PGS001801 (PRS_Ratio) |
PSS007722| European Ancestry| 19,229 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: Chronic obstructive pulmonary disease (moderate-to-severe) | — | — | Odds Ratio of Combined PRS (OR): 1.81 [1.74, 1.88) | Age, sex, height, smoking pack-years, PCs of genetic ancestry, study clinic, PRS_FEV1 | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-score |
PPM009321 | PGS001801 (PRS_Ratio) |
PSS007723| Multi-ancestry (excluding European)| 7,122 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: Chronic obstructive pulmonary disease (moderate-to-severe) | — | — | Odds Ratio of Combined PRS (OR): 1.42 [1.34, 1.51) | Age, sex, height, smoking pack-years, PCs of genetic ancestry, study clinic, PRS_FEV1 | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-score |
PPM009317 | PGS001801 (PRS_Ratio) |
PSS007721| European Ancestry| 5,175 individuals |
PGP000264 | Moll M et al. Lancet Respir Med (2020) |
Reported Trait: GOLD spirometry grades | — | — | Association (p-value): 2.02e-69 | — | — |
PPM015566 | PGS001801 (PRS_Ratio) |
PSS009985| European Ancestry| 6,647 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 1.55 [1.41, 1.71] | AUROC: 0.739 [0.718, 0.761] | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM015567 | PGS001801 (PRS_Ratio) |
PSS009983| African Ancestry| 2,464 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 1.23 [1.05, 1.43] | AUROC: 0.635 [0.595, 0.675] | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM015568 | PGS001801 (PRS_Ratio) |
PSS009984| European Ancestry| 6,812 individuals |
PGP000385 | Zhang J et al. Eur Respir J (2022) |Ext. |
Reported Trait: Incident chronic obstructive pulmonary disease before age 50 years | OR: 2.47 [2.12, 2.88] | — | — | PGS001800, early-life risk factors, principal components of genetic ancestry | NOTE: A combined PRS is used to account for both PRS. The combined score can be derived using code from: http://www.copdconsortium.org/polygenic-risk-scor |
PPM013091 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0321 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013140 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0411 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013238 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0732 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013189 | PGS002326 (lung_FEV1FVCzSMOKE.BOLT-LMM) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.1332 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013379 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013428 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0242 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013477 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0766 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013526 | PGS002398 (lung_FEV1FVCzSMOKE.P+T.0.0001) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0316 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013722 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0272 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013575 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013624 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0144 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013673 | PGS002447 (lung_FEV1FVCzSMOKE.P+T.0.001) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0763 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013771 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013820 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0068 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013869 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0235 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013918 | PGS002496 (lung_FEV1FVCzSMOKE.P+T.0.01) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0058 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM013967 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0125 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014016 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0364 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014065 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0635 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014114 | PGS002545 (lung_FEV1FVCzSMOKE.P+T.1e-06) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.031 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014163 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0179 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014212 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0328 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014261 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0551 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014310 | PGS002594 (lung_FEV1FVCzSMOKE.P+T.5e-08) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0277 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014408 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0481 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014359 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0403 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014457 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.1362 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014506 | PGS002643 (lung_FEV1FVCzSMOKE.PolyFun-pred) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model when combined with BOLT-LMM vs. covariates alone): 0.0736 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | See lung_FEV1FVCzSMOKE.mixweights file at http://data.broadinstitute.org/alkesgroup/polypred_results for combination weights |
PPM014555 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009747| African Ancestry| 4,243 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0379 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014604 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009748| East Asian Ancestry| 679 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0601 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014653 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009749| European Ancestry| 34,753 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.1281 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM014702 | PGS002692 (lung_FEV1FVCzSMOKE.SBayesR) |
PSS009750| South Asian Ancestry| 5,538 individuals |
PGP000332 | Weissbrod O et al. Nat Genet (2022) |
Reported Trait: FEV1/FVC Ratio | — | — | Incremental R2 (full model vs. covariates alone): 0.0738 | age, sex, age*sex, assessment center, genotyping array, 10 PCs | — |
PPM017275 | PGS003465 (LDPred2_FEV1FVC) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Respiratory event index | β: -0.01 (0.01) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM017298 | PGS003465 (LDPred2_FEV1FVC) |
PSS010185| Hispanic or Latin American Ancestry| 1,115 individuals |
PGP000456 | Zhang Y et al. EBioMedicine (2022) |
Reported Trait: Obstructive sleep apnea | β: -0.042 (0.024) | — | — | Age, sex, center, 5 genetic PCs, Hispanic/Latino background, BMI | — |
PPM018752 | PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PSS011096| European Ancestry| 320,656 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.2787 [0.2753, 0.282] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018756 | PGS003862 (multiancestry_LF_GRS_FF_weights_EUR) |
PSS011092| European Ancestry| 11,074 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.63 [1.56, 1.71] | — | — | age, age^2, sex, height, smoking | — |
PPM018753 | PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PSS011093| African Ancestry| 4,227 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.1534 [0.1106, 0.1961] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018757 | PGS003863 (multiancestry_LF_GRS_FF_weights_AFR) |
PSS011091| African Ancestry| 2,886 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: Chronic obstructive pulmonary disease | OR: 1.23 [1.13, 1.34] | — | — | age, age^2, sex, height, smoking | — |
PPM018754 | PGS003864 (multiancestry_LF_GRS_FF_weights_AMR) |
PSS011094| Hispanic or Latin American Ancestry| 2,798 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.254 [0.2163, 0.2917] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PPM018755 | PGS003865 (multiancestry_LF_GRS_FF_weights_EAS) |
PSS011095| East Asian Ancestry| 1,564 individuals |
PGP000500 | Shrine N et al. Nat Genet (2023) |
Reported Trait: FEV1/FVC ratio | β: 0.196 [0.1203, 0.2716] | — | — | age, age^2, sex, height, smoking, 10 genetic PCs | Beta = Standard deviation (SD) change of FEV1/FVC per SD change of GRS |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS000352 | — | — | 4,225 individuals | — | African unspecified | — | UKB | — |
PSS000353 | — | — | 1,208 individuals | — | Other admixed ancestry (Admixed African (unspecified) and European) |
— | UKB | — |
PSS000354 | — | — | 1,607 individuals | — | East Asian | — | UKB | — |
PSS000355 | — | — | 303,570 individuals | — | European | — | UKB | — |
PSS000356 | — | — | 6,033 individuals | — | Other admixed ancestry | — | UKB | — |
PSS000357 | — | — | 6,358 individuals | — | South Asian | — | UKB | — |
PSS009915 | — | — | 8,144 individuals | — | European (Non Hispanic White) |
— | COPDGene, SPIROMICS | — |
PSS009914 | — | — | 3,627 individuals | — | African American or Afro-Caribbean (African American) |
— | COPDGene, SPIROMICS | — |
PSS009747 | — | — | 4,243 individuals | — | African unspecified | — | UKB | — |
PSS009748 | — | — | 679 individuals | — | East Asian | — | UKB | — |
PSS009750 | — | — | 5,538 individuals | — | South Asian | — | UKB | — |
PSS009749 | — | — | 34,753 individuals | — | European | Non-British European | UKB | — |
PSS011096 | — | — | 320,656 individuals | — | European | — | UKB | — |
PSS011095 | — | — | 1,564 individuals | — | East Asian | — | UKB | — |
PSS010185 | — | — | 1,115 individuals, 41.1 % Male samples |
Mean = 46.18 years | Hispanic or Latin American | — | HCHS, SOL | — |
PSS009983 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 2,464 individuals, 57.6 % Male samples |
— | African American or Afro-Caribbean (African American) |
— | COPDGene | — |
PSS009984 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 6,812 individuals | — | European | — | FHS | — |
PSS009985 | Age of diagnosis was defined using age at earliest exam when moderate-to-severe COPD (modified Global Initiative for Chronic Obstructive Lung Disease (GOLD) grade 2–4 using pre-bronchodilator spirometry) was observed. We defined COPD occurring early in life as age at diagnosis <50 year | — | 6,647 individuals, 52.3 % Male samples |
— | European (Non-Hispanic White) |
— | COPDGene | — |
PSS011094 | — | — | 2,798 individuals | — | Hispanic or Latin American | — | UKB | — |
PSS007721 | — | — | 5,175 individuals, 52.27 % Male samples |
— | European | — | COPDGene | — |
PSS007722 | — | — | [ ,
52.27 % Male samples |
— | European | — | COPDGene | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
36.19 % Male samples |
— | European | — | CHS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
66.34 % Male samples |
— | European | — | ECLIPSE | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
63.74 % Male samples |
— | European | — | LHS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
47.66 % Male samples |
— | European | — | MESA | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
83.12 % Male samples |
— | European | — | NAS, NETT | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
42.87 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
46.73 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
43.36 % Male samples |
— | European | — | RS | Fixed-effects meta-analysis |
PSS007722 | — | — | [ ,
52.85 % Male samples |
— | European | — | SPIROMICS | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
57.62 % Male samples |
— | African American or Afro-Caribbean | — | COPDGene | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
34.49 % Male samples |
— | African American or Afro-Caribbean | — | CHS | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
74.56 % Male samples |
— | Not reported | — | NR | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
46.58 % Male samples |
— | African American or Afro-Caribbean | — | MESA | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
49.89 % Male samples |
— | East Asian | — | MESA | Fixed-effects meta-analysis |
PSS007723 | — | — | [ ,
47.26 % Male samples |
— | Hispanic or Latin American | — | MESA | Fixed-effects meta-analysis |
PSS004771 | — | — | 5,852 individuals | — | African unspecified | — | UKB | — |
PSS004772 | — | — | 1,587 individuals | — | East Asian | — | UKB | — |
PSS004773 | — | — | 22,763 individuals | — | European | non-white British ancestry | UKB | — |
PSS004774 | — | — | 7,136 individuals | — | South Asian | — | UKB | — |
PSS004775 | — | — | 61,887 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS011091 | — | — | [
|
— | African unspecified | — | COPDGene, SPIROMICS | — |
PSS011092 | — | — | [
|
— | European | — | 6 cohorts
|
— |
PSS011093 | — | — | 4,227 individuals | — | African unspecified | — | UKB | — |
PSS000344 | — | — | [
|
— | African American or Afro-Caribbean | — | COPDGene | — |
PSS000345 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | East Asian (Chinese) |
— | CKB | — |
PSS000346 | — | — | [
|
— | European | — | 6 cohorts
|
— |
PSS000347 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | African unspecified | — | UKB | — |
PSS000348 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | European | — | UKB | — |
PSS000349 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | Other admixed ancestry | — | UKB | — |
PSS000350 | FEV1/FVC<0.7 and FEV1<80% predicted (i.e. corresponding to GOLD 2-4 standards) | — | [
|
— | South Asian | — | UKB | — |
PSS000351 | — | — | 72,796 individuals | — | East Asian (Chinese) |
— | CKB | — |