Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0009631 |
Description | A sudden movement downward, usually resulting in injury. [ NCI ] | Trait category |
Other trait
|
Mapped terms |
2 mapped terms
|
Polygenic Score ID & Name | PGS Publication ID (PGP) | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants |
Ancestry distribution GWAS Dev Eval |
Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS001012 (GBE_QT_FC1002296) |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Number of falls in the last year | fall | 2,103 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001012/ScoringFiles/PGS001012.txt.gz |
PGS001916 (portability-PLR_fall_1y) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Falls in the last year | fall | 9,917 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001916/ScoringFiles/PGS001916.txt.gz |
PGS002132 (portability-ldpred2_fall_1y) |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Falls in the last year | fall | 826,502 | - |
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002132/ScoringFiles/PGS002132.txt.gz |
PGS Performance Metric ID (PPM) |
Evaluated Score |
PGS Sample Set ID (PSS) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
Classification Metrics | Other Metrics | Covariates Included in the Model |
PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM007823 | PGS001012 (GBE_QT_FC1002296) |
PSS007596| African Ancestry| 6,336 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Falls in the last year | — | — | Incremental R2 (full-covars): -0.00094 R²: 0.01681 [0.01062, 0.02301] PGS R2 (no covariates): 3e-05 [-0.00022, 0.00027] |
age, sex, UKB array type, Genotype PCs | — |
PPM007824 | PGS001012 (GBE_QT_FC1002296) |
PSS007597| East Asian Ancestry| 1,629 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Falls in the last year | — | — | R²: 0.0157 [0.00401, 0.02739] Incremental R2 (full-covars): -0.00264 PGS R2 (no covariates): 0.00011 [-0.00088, 0.00109] |
age, sex, UKB array type, Genotype PCs | — |
PPM007825 | PGS001012 (GBE_QT_FC1002296) |
PSS007598| European Ancestry| 24,790 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Falls in the last year | — | — | R²: 0.0119 [0.00923, 0.01458] Incremental R2 (full-covars): 0.00165 PGS R2 (no covariates): 0.00166 [0.00065, 0.00267] |
age, sex, UKB array type, Genotype PCs | — |
PPM007826 | PGS001012 (GBE_QT_FC1002296) |
PSS007599| South Asian Ancestry| 7,443 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Falls in the last year | — | — | R²: 0.01243 [0.00756, 0.01731] Incremental R2 (full-covars): -0.00079 PGS R2 (no covariates): 0.00021 [-0.00043, 0.00084] |
age, sex, UKB array type, Genotype PCs | — |
PPM007827 | PGS001012 (GBE_QT_FC1002296) |
PSS007600| European Ancestry| 67,306 individuals |
PGP000244 | Tanigawa Y et al. PLoS Genet (2022) |
Reported Trait: Falls in the last year | — | — | R²: 0.01122 [0.00964, 0.0128] Incremental R2 (full-covars): 0.00106 PGS R2 (no covariates): 0.00126 [0.00073, 0.0018] |
age, sex, UKB array type, Genotype PCs | — |
PPM010211 | PGS001916 (portability-PLR_fall_1y) |
PSS009404| European Ancestry| 19,947 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0228 [0.0089, 0.0366] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010212 | PGS001916 (portability-PLR_fall_1y) |
PSS009178| European Ancestry| 4,070 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0369 [0.0061, 0.0676] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010213 | PGS001916 (portability-PLR_fall_1y) |
PSS008732| European Ancestry| 6,602 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0428 [0.0187, 0.0669] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010214 | PGS001916 (portability-PLR_fall_1y) |
PSS008506| Greater Middle Eastern Ancestry| 1,089 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0845 [0.0246, 0.1437] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010215 | PGS001916 (portability-PLR_fall_1y) |
PSS008284| South Asian Ancestry| 6,030 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.019 [-0.0063, 0.0442] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010216 | PGS001916 (portability-PLR_fall_1y) |
PSS008061| East Asian Ancestry| 1,755 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0303 [-0.0167, 0.0773] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010217 | PGS001916 (portability-PLR_fall_1y) |
PSS007848| African Ancestry| 2,437 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0163 [-0.0236, 0.0562] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM010218 | PGS001916 (portability-PLR_fall_1y) |
PSS008952| African Ancestry| 3,814 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0154 [-0.0165, 0.0472] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011911 | PGS002132 (portability-ldpred2_fall_1y) |
PSS009404| European Ancestry| 19,947 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0504 [0.0365, 0.0642] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011912 | PGS002132 (portability-ldpred2_fall_1y) |
PSS009178| European Ancestry| 4,070 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0507 [0.02, 0.0814] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011913 | PGS002132 (portability-ldpred2_fall_1y) |
PSS008732| European Ancestry| 6,602 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0625 [0.0384, 0.0865] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011914 | PGS002132 (portability-ldpred2_fall_1y) |
PSS008506| Greater Middle Eastern Ancestry| 1,089 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0693 [0.0093, 0.1287] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011915 | PGS002132 (portability-ldpred2_fall_1y) |
PSS008284| South Asian Ancestry| 6,030 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0393 [0.014, 0.0645] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011916 | PGS002132 (portability-ldpred2_fall_1y) |
PSS008061| East Asian Ancestry| 1,755 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0553 [0.0083, 0.1021] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011917 | PGS002132 (portability-ldpred2_fall_1y) |
PSS007848| African Ancestry| 2,437 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0471 [0.0073, 0.0868] | sex, age, birth date, deprivation index, 16 PCs | — |
PPM011918 | PGS002132 (portability-ldpred2_fall_1y) |
PSS008952| African Ancestry| 3,814 individuals |
PGP000263 | Privé F et al. Am J Hum Genet (2022) |
Reported Trait: Falls in the last year | — | — | Partial Correlation (partial-r): 0.0523 [0.0206, 0.084] | sex, age, birth date, deprivation index, 16 PCs | — |
PGS Sample Set ID (PSS) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS007848 | — | — | 2,437 individuals | — | African American or Afro-Caribbean | Carribean | UKB | — |
PSS008732 | — | — | 6,602 individuals | — | European | Italy (South Europe) | UKB | — |
PSS007596 | — | — | 6,336 individuals | — | African unspecified | — | UKB | — |
PSS007597 | — | — | 1,629 individuals | — | East Asian | — | UKB | — |
PSS007598 | — | — | 24,790 individuals | — | European | non-white British ancestry | UKB | — |
PSS007599 | — | — | 7,443 individuals | — | South Asian | — | UKB | — |
PSS007600 | — | — | 67,306 individuals | — | European | white British ancestry | UKB | Testing cohort (heldout set) |
PSS008952 | — | — | 3,814 individuals | — | African unspecified | Nigeria (West Africa) | UKB | — |
PSS009178 | — | — | 4,070 individuals | — | European | Poland (NE Europe) | UKB | — |
PSS008506 | — | — | 1,089 individuals | — | Greater Middle Eastern (Middle Eastern, North African or Persian) | Iran (Middle East) | UKB | — |
PSS009404 | — | — | 19,947 individuals | — | European | UK (+ Ireland) | UKB | — |
PSS008061 | — | — | 1,755 individuals | — | East Asian | China (East Asia) | UKB | — |
PSS008284 | — | — | 6,030 individuals | — | South Asian | India (South Asia) | UKB | — |