Trait: Abnormal EKG

Trait Information
Identifier HP_0003115
Description Abnormal rhythm of the heart.
Trait category
Cardiovascular disease
Synonyms 4 synonyms
  • Abnormal ECG
  • Abnormal EKG
  • Abnormal electrocardiogram
  • EKG abnormality
Mapped terms 2 mapped terms
  • SNOMEDCT_US:102594003
  • UMLS:C0522055

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000914
(PRS6_EC)
 PGP000241 |
Wang M et al. Sci Rep (2021)
 Abnormal electrocardiogram Abnormal EKG 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000914/ScoringFiles/PGS000914.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM002983 PGS000914
(PRS6_EC)
 PSS001451|
East Asian Ancestry|
100 individuals
 PGP000241 |
Wang M et al. Sci Rep (2021)
 Reported Trait: Abnormal electrocardiogram — AUROC: 0.72 Youden's index: 0.4 Age, sex —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS001451 — — 100 individuals — East Asian
(Han Chinese)		 — NR —