Trait: polyp of colon

Trait Information
Identifier MONDO_0021400
Description A polyp that involves the colon. [MONDO: patterns/location]
Trait category
Digestive system disorder
Synonyms 3 synonyms
  • colon polyp
  • colonic polyp
  • polyp of the colon
Mapped terms 6 mapped terms
  • ICD10CM:K63.5
  • MEDGEN:3166
  • MESH:D003111
  • NCIT:C2954
  • SCTID:68496003
  • UMLS:C0009376

Associated Polygenic Score(s)

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Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005151
(Colon polyp (CT-SLEB; EAS+EUR))
 PGP000704 |
Jung HU et al. Commun Biol (2025)
 Colon polyp polyp of colon 496,139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005151/ScoringFiles/PGS005151.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM022371 PGS005151
(Colon polyp (CT-SLEB; EAS+EUR))
 PSS011927|
East Asian Ancestry|
58,612 individuals
 PGP000704 |
Jung HU et al. Commun Biol (2025)
 Reported Trait: Colon polyp β: 1.15146 — — age, sex —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011927 — —
[
  • 3,336 cases
  • , 55,276 controls
]
 — East Asian
(Korean)		 — HEXA —