PGS Publication: PGP000489

Publication Information (EuropePMC)
Title A new method for multiancestry polygenic prediction improves performance across diverse populations.
PubMed ID 37749244(Europe PMC)
doi 10.1038/s41588-023-01501-z
Publication Date Sept. 25, 2023
Journal Nat Genet
Author(s) Zhang H, Zhan J, Jin J, Zhang J, Lu W, Zhao R, Ahearn TU, Yu Z, O'Connell J, Jiang Y, Chen T, Okuhara D, 23andMe Research Team, Garcia-Closas M, Lin X, Koelsch BL, Chatterjee N.
Released in PGS Catalog: Sept. 1, 2023

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported

PGS Developed By This Publication

Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003844
(bmi_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 87
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003844/ScoringFiles/PGS003844.txt.gz
PGS003808
(logTG_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 109
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003808/ScoringFiles/PGS003808.txt.gz
PGS003820
(TC_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 218
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003820/ScoringFiles/PGS003820.txt.gz
PGS003818
(TC_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 4,691
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003818/ScoringFiles/PGS003818.txt.gz
PGS003825
(TC_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 230
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003825/ScoringFiles/PGS003825.txt.gz
PGS003769
(HDL_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 198
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003769/ScoringFiles/PGS003769.txt.gz
PGS003791
(LDL_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 80
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003791/ScoringFiles/PGS003791.txt.gz
PGS003796
(LDL_SAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 25
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003796/ScoringFiles/PGS003796.txt.gz
PGS003801
(logTG_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 33,687
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003801/ScoringFiles/PGS003801.txt.gz
PGS003802
(logTG_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,492,288
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003802/ScoringFiles/PGS003802.txt.gz
PGS003809
(logTG_EAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,189,464
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003809/ScoringFiles/PGS003809.txt.gz
PGS003810
(logTG_EAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,189,464
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003810/ScoringFiles/PGS003810.txt.gz
PGS003793
(LDL_EAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,191,112
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003793/ScoringFiles/PGS003793.txt.gz
PGS003813
(logTG_SAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 40
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003813/ScoringFiles/PGS003813.txt.gz
PGS003826
(TC_EAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 820,996
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003826/ScoringFiles/PGS003826.txt.gz
PGS003827
(TC_EAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 820,996
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003827/ScoringFiles/PGS003827.txt.gz
PGS003767
(HDL_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 12,656
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003767/ScoringFiles/PGS003767.txt.gz
PGS003773
(HDL_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,102,319
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003773/ScoringFiles/PGS003773.txt.gz
PGS003774
(HDL_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 117
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003774/ScoringFiles/PGS003774.txt.gz
PGS003778
(HDL_EAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 449,110
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003778/ScoringFiles/PGS003778.txt.gz
PGS003781
(HDL_SAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,473,121
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003781/ScoringFiles/PGS003781.txt.gz
PGS003783
(HDL_SAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 771,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003783/ScoringFiles/PGS003783.txt.gz
PGS003788
(LDL_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,679,610
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003788/ScoringFiles/PGS003788.txt.gz
PGS003797
(LDL_SAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,507,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003797/ScoringFiles/PGS003797.txt.gz
PGS003799
(LDL_SAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,155,363
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003799/ScoringFiles/PGS003799.txt.gz
PGS003800
(LDL_SAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 801,576
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003800/ScoringFiles/PGS003800.txt.gz
PGS003814
(logTG_SAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,507,338
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003814/ScoringFiles/PGS003814.txt.gz
PGS003831
(TC_SAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,468,958
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003831/ScoringFiles/PGS003831.txt.gz
PGS003837
(height_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 49
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003837/ScoringFiles/PGS003837.txt.gz
PGS003840
(height_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 300,880
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003840/ScoringFiles/PGS003840.txt.gz
PGS003845
(bmi_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 752,209
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003845/ScoringFiles/PGS003845.txt.gz
PGS003848
(bmi_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 741,723
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003848/ScoringFiles/PGS003848.txt.gz
PGS003776
(HDL_EAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 844,599
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003776/ScoringFiles/PGS003776.txt.gz
PGS003821
(TC_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,687,775
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003821/ScoringFiles/PGS003821.txt.gz
PGS003822
(TC_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,687,775
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003822/ScoringFiles/PGS003822.txt.gz
PGS003835
(height_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 4,847
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003835/ScoringFiles/PGS003835.txt.gz
PGS003832
(TC_SAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,468,958
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003832/ScoringFiles/PGS003832.txt.gz
PGS003780
(HDL_SAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,473,121
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003780/ScoringFiles/PGS003780.txt.gz
PGS003816
(logTG_SAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,155,382
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003816/ScoringFiles/PGS003816.txt.gz
PGS003838
(height_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 752,195
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003838/ScoringFiles/PGS003838.txt.gz
PGS003833
(TC_SAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003833/ScoringFiles/PGS003833.txt.gz
PGS003839
(height_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 817,204
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003839/ScoringFiles/PGS003839.txt.gz
PGS003829
(TC_EAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 431,780
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003829/ScoringFiles/PGS003829.txt.gz
PGS003830
(TC_SAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003830/ScoringFiles/PGS003830.txt.gz
PGS003805
(logTG_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,678,784
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003805/ScoringFiles/PGS003805.txt.gz
PGS003803
(logTG_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 116
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003803/ScoringFiles/PGS003803.txt.gz
PGS003786
(LDL_AFR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 188
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003786/ScoringFiles/PGS003786.txt.gz
PGS003824
(TC_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,122,865
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003824/ScoringFiles/PGS003824.txt.gz
PGS003836
(height_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 564,325
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003836/ScoringFiles/PGS003836.txt.gz
PGS003779
(HDL_SAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 71
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003779/ScoringFiles/PGS003779.txt.gz
PGS003785
(LDL_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,490,736
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003785/ScoringFiles/PGS003785.txt.gz
PGS003787
(LDL_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,679,610
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003787/ScoringFiles/PGS003787.txt.gz
PGS003817
(logTG_SAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 798,330
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003817/ScoringFiles/PGS003817.txt.gz
PGS003804
(logTG_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,678,784
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003804/ScoringFiles/PGS003804.txt.gz
PGS003812
(logTG_EAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 563,207
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003812/ScoringFiles/PGS003812.txt.gz
PGS003815
(logTG_SAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,507,338
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003815/ScoringFiles/PGS003815.txt.gz
PGS003819
(TC_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,490,151
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003819/ScoringFiles/PGS003819.txt.gz
PGS003834
(TC_SAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 770,490
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003834/ScoringFiles/PGS003834.txt.gz
PGS003841
(height_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Height body height 741,637
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003841/ScoringFiles/PGS003841.txt.gz
PGS003784
(LDL_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 3,754
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003784/ScoringFiles/PGS003784.txt.gz
PGS003794
(LDL_EAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,155,363
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003794/ScoringFiles/PGS003794.txt.gz
PGS003790
(LDL_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,120,053
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003790/ScoringFiles/PGS003790.txt.gz
PGS003777
(HDL_EAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,155,488
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003777/ScoringFiles/PGS003777.txt.gz
PGS003789
(LDL_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,155,363
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003789/ScoringFiles/PGS003789.txt.gz
PGS003806
(logTG_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,155,382
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003806/ScoringFiles/PGS003806.txt.gz
PGS003811
(logTG_EAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,155,382
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003811/ScoringFiles/PGS003811.txt.gz
PGS003828
(TC_EAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003828/ScoringFiles/PGS003828.txt.gz
PGS003843
(bmi_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 564,332
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003843/ScoringFiles/PGS003843.txt.gz
PGS003842
(bmi_EUR_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 145,046
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003842/ScoringFiles/PGS003842.txt.gz
PGS003846
(bmi_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 817,189
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003846/ScoringFiles/PGS003846.txt.gz
PGS003847
(bmi_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Body mass index (BMI) body mass index 300,864
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003847/ScoringFiles/PGS003847.txt.gz
PGS003770
(HDL_AFR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,678,653
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003770/ScoringFiles/PGS003770.txt.gz
PGS003771
(HDL_AFR_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,678,653
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003771/ScoringFiles/PGS003771.txt.gz
PGS003782
(HDL_SAS_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,155,488
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003782/ScoringFiles/PGS003782.txt.gz
PGS003792
(LDL_EAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,191,112
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003792/ScoringFiles/PGS003792.txt.gz
PGS003798
(LDL_SAS_weighted_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,507,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003798/ScoringFiles/PGS003798.txt.gz
PGS003768
(HDL_EUR_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,489,018
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003768/ScoringFiles/PGS003768.txt.gz
PGS003772
(HDL_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,155,488
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003772/ScoringFiles/PGS003772.txt.gz
PGS003775
(HDL_EAS_LDpred2)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 844,599
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003775/ScoringFiles/PGS003775.txt.gz
PGS003795
(LDL_EAS_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 564,379
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003795/ScoringFiles/PGS003795.txt.gz
PGS003807
(logTG_AFR_CTSLEB)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Log triglycerides triglyceride measurement 1,106,476
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003807/ScoringFiles/PGS003807.txt.gz
PGS003823
(TC_AFR_PRSCSx)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 1,155,228
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003823/ScoringFiles/PGS003823.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM018574 PGS003767
(HDL_EUR_CT)
 PSS011039|
European Ancestry|
8,742 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.15258 — —
PPM018575 PGS003768
(HDL_EUR_LDpred2)
 PSS011039|
European Ancestry|
8,742 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.1317 — —
PPM018576 PGS003769
(HDL_AFR_CT)
 PSS011037|
African Ancestry|
3,983 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.0619 — —
PPM018577 PGS003770
(HDL_AFR_LDpred2)
 PSS011037|
African Ancestry|
3,983 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.03136 — —
PPM018578 PGS003771
(HDL_AFR_weighted_LDpred2)
 PSS011037|
African Ancestry|
3,983 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.04141 — —
PPM018579 PGS003772
(HDL_AFR_PRSCSx)
 PSS011037|
African Ancestry|
3,983 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.08167 — —
PPM018580 PGS003773
(HDL_AFR_CTSLEB)
 PSS011037|
African Ancestry|
3,983 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.09223 — —
PPM018581 PGS003774
(HDL_EAS_CT)
 PSS011038|
East Asian Ancestry|
892 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.10725 — —
PPM018582 PGS003775
(HDL_EAS_LDpred2)
 PSS011038|
East Asian Ancestry|
892 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.06521 — —
PPM018583 PGS003776
(HDL_EAS_weighted_LDpred2)
 PSS011038|
East Asian Ancestry|
892 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.0832 — —
PPM018584 PGS003777
(HDL_EAS_PRSCSx)
 PSS011038|
East Asian Ancestry|
892 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.14723 — —
PPM018585 PGS003778
(HDL_EAS_CTSLEB)
 PSS011038|
East Asian Ancestry|
892 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.13551 — —
PPM018586 PGS003779
(HDL_SAS_CT)
 PSS011040|
South Asian Ancestry|
4,702 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.08221 — —
PPM018587 PGS003780
(HDL_SAS_LDpred2)
 PSS011040|
South Asian Ancestry|
4,702 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.04225 — —
PPM018588 PGS003781
(HDL_SAS_weighted_LDpred2)
 PSS011040|
South Asian Ancestry|
4,702 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.08793 — —
PPM018589 PGS003782
(HDL_SAS_PRSCSx)
 PSS011040|
South Asian Ancestry|
4,702 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.14637 — —
PPM018591 PGS003784
(LDL_EUR_CT)
 PSS011045|
European Ancestry|
9,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.07541 — —
PPM018592 PGS003785
(LDL_EUR_LDpred2)
 PSS011045|
European Ancestry|
9,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.05473 — —
PPM018593 PGS003786
(LDL_AFR_CT)
 PSS011043|
African Ancestry|
4,292 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.08924 — —
PPM018594 PGS003787
(LDL_AFR_LDpred2)
 PSS011043|
African Ancestry|
4,292 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.03349 — —
PPM018595 PGS003788
(LDL_AFR_weighted_LDpred2)
 PSS011043|
African Ancestry|
4,292 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.04384 — —
PPM018596 PGS003789
(LDL_AFR_PRSCSx)
 PSS011043|
African Ancestry|
4,292 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.08679 — —
PPM018597 PGS003790
(LDL_AFR_CTSLEB)
 PSS011043|
African Ancestry|
4,292 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.11584 — —
PPM018598 PGS003791
(LDL_EAS_CT)
 PSS011044|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.02274 — —
PPM018600 PGS003793
(LDL_EAS_weighted_LDpred2)
 PSS011044|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.03105 — —
PPM018601 PGS003794
(LDL_EAS_PRSCSx)
 PSS011044|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.0534 — —
PPM018602 PGS003795
(LDL_EAS_CTSLEB)
 PSS011044|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.0239 — —
PPM018603 PGS003796
(LDL_SAS_CT)
 PSS011046|
South Asian Ancestry|
5,137 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.02586 — —
PPM018604 PGS003797
(LDL_SAS_LDpred2)
 PSS011046|
South Asian Ancestry|
5,137 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.01341 — —
PPM018605 PGS003798
(LDL_SAS_weighted_LDpred2)
 PSS011046|
South Asian Ancestry|
5,137 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.02782 — —
PPM018606 PGS003799
(LDL_SAS_PRSCSx)
 PSS011046|
South Asian Ancestry|
5,137 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.04872 — —
PPM018607 PGS003800
(LDL_SAS_CTSLEB)
 PSS011046|
South Asian Ancestry|
5,137 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.03323 — —
PPM018608 PGS003801
(logTG_EUR_CT)
 PSS011053|
European Ancestry|
9,536 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.09207 — —
PPM018610 PGS003803
(logTG_AFR_CT)
 PSS011051|
African Ancestry|
4,300 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.02953 — —
PPM018611 PGS003804
(logTG_AFR_LDpred2)
 PSS011051|
African Ancestry|
4,300 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.02091 — —
PPM018612 PGS003805
(logTG_AFR_weighted_LDpred2)
 PSS011051|
African Ancestry|
4,300 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.02309 — —
PPM018613 PGS003806
(logTG_AFR_PRSCSx)
 PSS011051|
African Ancestry|
4,300 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.02188 — —
PPM018614 PGS003807
(logTG_AFR_CTSLEB)
 PSS011051|
African Ancestry|
4,300 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.04176 — —
PPM018615 PGS003808
(logTG_EAS_CT)
 PSS011052|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.06821 — —
PPM018616 PGS003809
(logTG_EAS_LDpred2)
 PSS011052|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.06507 — —
PPM018618 PGS003811
(logTG_EAS_PRSCSx)
 PSS011052|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.10366 — —
PPM018619 PGS003812
(logTG_EAS_CTSLEB)
 PSS011052|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.09119 — —
PPM018620 PGS003813
(logTG_SAS_CT)
 PSS011054|
South Asian Ancestry|
5,143 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.06482 — —
PPM018621 PGS003814
(logTG_SAS_LDpred2)
 PSS011054|
South Asian Ancestry|
5,143 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.07951 — —
PPM018622 PGS003815
(logTG_SAS_weighted_LDpred2)
 PSS011054|
South Asian Ancestry|
5,143 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.10383 — —
PPM018623 PGS003816
(logTG_SAS_PRSCSx)
 PSS011054|
South Asian Ancestry|
5,143 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.1212 — —
PPM018625 PGS003818
(TC_EUR_CT)
 PSS011049|
European Ancestry|
9,539 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.07254 — —
PPM018626 PGS003819
(TC_EUR_LDpred2)
 PSS011049|
European Ancestry|
9,539 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.0626 — —
PPM018627 PGS003820
(TC_AFR_CT)
 PSS011047|
African Ancestry|
4,302 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.07482 — —
PPM018628 PGS003821
(TC_AFR_LDpred2)
 PSS011047|
African Ancestry|
4,302 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.05914 — —
PPM018629 PGS003822
(TC_AFR_weighted_LDpred2)
 PSS011047|
African Ancestry|
4,302 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.07122 — —
PPM018630 PGS003823
(TC_AFR_PRSCSx)
 PSS011047|
African Ancestry|
4,302 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.08584 — —
PPM018631 PGS003824
(TC_AFR_CTSLEB)
 PSS011047|
African Ancestry|
4,302 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.10208 — —
PPM018633 PGS003826
(TC_EAS_LDpred2)
 PSS011048|
East Asian Ancestry|
971 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.07017 — —
PPM018634 PGS003827
(TC_EAS_weighted_LDpred2)
 PSS011048|
East Asian Ancestry|
971 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.08867 — —
PPM018635 PGS003828
(TC_EAS_PRSCSx)
 PSS011048|
East Asian Ancestry|
971 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.05696 — —
PPM018636 PGS003829
(TC_EAS_CTSLEB)
 PSS011048|
East Asian Ancestry|
971 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.07409 — —
PPM018637 PGS003830
(TC_SAS_CT)
 PSS011050|
South Asian Ancestry|
5,153 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.01804 — —
PPM018638 PGS003831
(TC_SAS_LDpred2)
 PSS011050|
South Asian Ancestry|
5,153 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.02349 — —
PPM018639 PGS003832
(TC_SAS_weighted_LDpred2)
 PSS011050|
South Asian Ancestry|
5,153 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.03949 — —
PPM018641 PGS003834
(TC_SAS_CTSLEB)
 PSS011050|
South Asian Ancestry|
5,153 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.04008 — —
PPM018642 PGS003835
(height_EUR_CT)
 PSS011042|
European Ancestry|
9,969 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.09039 — —
PPM018643 PGS003836
(height_EUR_LDpred2)
 PSS011042|
European Ancestry|
9,969 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.16006 — —
PPM018644 PGS003837
(height_AFR_CT)
 PSS011041|
African Ancestry|
4,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.00285 — —
PPM018645 PGS003838
(height_AFR_LDpred2)
 PSS011041|
African Ancestry|
4,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.00695 — —
PPM018646 PGS003839
(height_AFR_weighted_LDpred2)
 PSS011041|
African Ancestry|
4,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.03319 — —
PPM018647 PGS003840
(height_AFR_PRSCSx)
 PSS011041|
African Ancestry|
4,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.04139 — —
PPM018648 PGS003841
(height_AFR_CTSLEB)
 PSS011041|
African Ancestry|
4,527 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Height — — R²: 0.03775 — —
PPM018649 PGS003842
(bmi_EUR_CT)
 PSS011036|
European Ancestry|
9,958 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.0192 — —
PPM018650 PGS003843
(bmi_EUR_LDpred2)
 PSS011036|
European Ancestry|
9,958 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.04099 — —
PPM018651 PGS003844
(bmi_AFR_CT)
 PSS011055|
African Ancestry|
4,519 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.00111 — —
PPM018653 PGS003846
(bmi_AFR_weighted_LDpred2)
 PSS011055|
African Ancestry|
4,519 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.00711 — —
PPM018654 PGS003847
(bmi_AFR_PRSCSx)
 PSS011055|
African Ancestry|
4,519 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.00849 — —
PPM018655 PGS003848
(bmi_AFR_CTSLEB)
 PSS011055|
African Ancestry|
4,519 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.01027 — —
PPM018590 PGS003783
(HDL_SAS_CTSLEB)
 PSS011040|
South Asian Ancestry|
4,702 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: High-density lipoprotein cholesterol — — R²: 0.14886 — —
PPM018599 PGS003792
(LDL_EAS_LDpred2)
 PSS011044|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Low-density lipoprotein cholesterol — — R²: 0.0184 — —
PPM018609 PGS003802
(logTG_EUR_LDpred2)
 PSS011053|
European Ancestry|
9,536 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.10527 — —
PPM018617 PGS003810
(logTG_EAS_weighted_LDpred2)
 PSS011052|
East Asian Ancestry|
970 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.09453 — —
PPM018624 PGS003817
(logTG_SAS_CTSLEB)
 PSS011054|
South Asian Ancestry|
5,143 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Log triglycerides — — R²: 0.10368 — —
PPM018632 PGS003825
(TC_EAS_CT)
 PSS011048|
East Asian Ancestry|
971 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.06332 — —
PPM018640 PGS003833
(TC_SAS_PRSCSx)
 PSS011050|
South Asian Ancestry|
5,153 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Total cholesterol — — R²: 0.04777 — —
PPM018652 PGS003845
(bmi_AFR_LDpred2)
 PSS011055|
African Ancestry|
4,519 individuals
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Reported Trait: Body mass index — — R²: 0.00051 — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011036 — — 9,958 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011037 — — 3,983 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —
PSS011038 — — 892 individuals,
32.0 % Male samples
 Mean = 52.47 years
Sd = 7.81 years		 East Asian — UKB —
PSS011039 — — 8,742 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011040 — — 4,702 individuals,
53.0 % Male samples
 Mean = 53.37 years
Sd = 8.43 years		 South Asian — UKB —
PSS011041 — — 4,527 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —
PSS011042 — — 9,969 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011043 — — 4,292 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —
PSS011044 — — 970 individuals,
32.0 % Male samples
 Mean = 52.47 years
Sd = 7.81 years		 East Asian — UKB —
PSS011045 — — 9,527 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011046 — — 5,137 individuals,
53.0 % Male samples
 Mean = 53.37 years
Sd = 8.43 years		 South Asian — UKB —
PSS011047 — — 4,302 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —
PSS011048 — — 971 individuals,
32.0 % Male samples
 Mean = 52.47 years
Sd = 7.81 years		 East Asian — UKB —
PSS011049 — — 9,539 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011050 — — 5,153 individuals,
53.0 % Male samples
 Mean = 53.37 years
Sd = 8.43 years		 South Asian — UKB —
PSS011051 — — 4,300 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —
PSS011052 — — 970 individuals,
32.0 % Male samples
 Mean = 52.47 years
Sd = 7.81 years		 East Asian — UKB —
PSS011053 — — 9,536 individuals,
47.0 % Male samples
 Mean = 56.86 years
Sd = 8.05 years		 European — UKB —
PSS011054 — — 5,143 individuals,
53.0 % Male samples
 Mean = 53.37 years
Sd = 8.43 years		 South Asian — UKB —
PSS011055 — — 4,519 individuals,
42.0 % Male samples
 Mean = 51.82 years
Sd = 8.06 years		 African American or Afro-Caribbean
(African American)		 — UKB —